Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00027 ATGGTTACCACTGCCAAATCTTCCAACCATCACTCCTCCTCTACTCCTCCCTCCCACCTCCACCCTTCCGATCCCAACTTCCCGCCAAAAAACCTTCCCTCGCCCTGGGCTCAAGTCGTTCGCGGTGGCGACCCCGAATCGCCGCCTGCCATTCACCAATCGCCGCCCTCAACGTCCTCCTCCTCCTCCTCACTCATTGCCGACCACCCCCCGTCCTCCGACTCTTCTCCCAAGGTCATTCCGGCGTCGCCGCCGCTCGACAATTCTAACACGGTTGGTGTCGCAGATAGCTCTGATGGCGCTGAGGACAATGCTGATCGTTCTAAGAAACCCGTTTGGAATAAGCCCTCAAACGGCGTCGTTGTGGAGACTGGGCCTGTAATGGGCGCTGAATCGTGGCCCTCTCTGTCTGCTGCATCTACCAAAGCTTCTGCTAAATTGCCAGCTGAATCGTCGTCCAAGACCGTTGCTGATGGATCACTCTCCACTTCTCAGGGGCAAATGACTTCACAGTCTTCTCAGAAACCAGCTACTGTTACTAATGCAAAACCTAATCCTGCAACAAATTATAATGTGCCTGGTAGACAAAGACCGATGAAGCGGGTAGGTGGTAGTGGCATTGTGTCTGGTCCTTCTCAGAGCAACTTCTCTAATCCTCCCCCACCACCGCCACCACCACCTTTTCCTGTATACCAGCTCCCACCAGTTAGCTATGGTATGGTACCTGTGGTACCTGAGCCTGCTCCAAGAGATCATTACCGTAATACTAACTGGGATCATAGACCAATGGTGGGGGGTTTTGTGCCTGGGATGAATGAATATCGTGGTTCATCTCACAGGAGTTATCTTGGGCCTCATCCACGAGGAGATGGTTCCTATCATAATAGTTACGGTAGCAGGCATGATCATGATCGTCGAAATTATGGGAATACCAGAGACACTTTTGTACATCAACCGAGGATGCCTCCTAGAGGATTACTGAGGCACCCACCTCCTAACTCTGCTGCTTTTGTGGGCCATCAACCCATTGGACCATTTGCTAACCCCATGGGTTTTTCTGAGTTTTATTACTATCAGCCAGTGGCAATGGAGCAGTTTACTGGTATGCCTTACTTCACGCCCAGCCCTCCTCCCACAACACTCTTTTCTGCTGCTGAATCTCCTCTGTCCAATATGATAGTCCGCCAAATTGACTATTACTTTAGTGATGCTAATTTAGTGAGAGATGAGTTTTTAAGGTCTAAAATGGATGAACAGGGTTGGGTTCCTGTTACTTTGATAGCAGACTTCCCTCGAGTTAAAAGTCTTACAACTAATGTTCAGTTGATACTGGATTCCATGAGAACTTCTTCAATAGTGGAAGTGCTGGGTGACAAGTTGAGAAGACATAATGAGTGGATGAAATGGGTGCCCTCTACTAAAAGACGGTCTGGATCTACTTCTACTTCGCCGTCTCCCCGTGGATCAAGATCCAATAACTTGACAGCTAATTTTCAAGCTATAACTATGGAAGAAACTGCAGAGTCATGTAGTCTGCATCAACTCACCAATGGTGGTGCTACCGGAAGTAGCACTTAA 1578 0.4905 MVTTAKSSNHHSSSTPPSHLHPSDPNFPPKNLPSPWAQVVRGGDPESPPAIHQSPPSTSSSSSSLIADHPPSSDSSPKVIPASPPLDNSNTVGVADSSDGAEDNADRSKKPVWNKPSNGVVVETGPVMGAESWPSLSAASTKASAKLPAESSSKTVADGSLSTSQGQMTSQSSQKPATVTNAKPNPATNYNVPGRQRPMKRVGGSGIVSGPSQSNFSNPPPPPPPPPFPVYQLPPVSYGMVPVVPEPAPRDHYRNTNWDHRPMVGGFVPGMNEYRGSSHRSYLGPHPRGDGSYHNSYGSRHDHDRRNYGNTRDTFVHQPRMPPRGLLRHPPPNSAAFVGHQPIGPFANPMGFSEFYYYQPVAMEQFTGMPYFTPSPPPTTLFSAAESPLSNMIVRQIDYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSSIVEVLGDKLRRHNEWMKWVPSTKRRSGSTSTSPSPRGSRSNNLTANFQAITMEETAESCSLHQLTNGGATGSST* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00027 525 MobiDBLite consensus disorder prediction 1 20 - -
Phac1g00027 525 MobiDBLite consensus disorder prediction 473 493 - -
Phac1g00027 525 MobiDBLite consensus disorder prediction 134 192 - -
Phac1g00027 525 SMART la 387 463 IPR006630 -
Phac1g00027 525 MobiDBLite consensus disorder prediction 53 71 - -
Phac1g00027 525 MobiDBLite consensus disorder prediction 1 226 - -
Phac1g00027 525 ProSiteProfiles La-type HTH domain profile. 383 472 IPR006630 -
Phac1g00027 525 PANTHER LUPUS LA PROTEIN-RELATED 130 476 IPR045180 -
Phac1g00027 525 FunFam la-related protein 1B isoform X2 379 469 - -
Phac1g00027 525 MobiDBLite consensus disorder prediction 82 97 - -
Phac1g00027 525 Pfam La domain 393 448 IPR006630 -
Phac1g00027 525 CDD LAM 391 462 - -
Phac1g00027 525 Gene3D - 382 473 IPR036388 -
Phac1g00027 525 MobiDBLite consensus disorder prediction 471 493 - -
Phac1g00027 525 SUPERFAMILY "Winged helix" DNA-binding domain 384 472 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00027 Phac-Chr1 276992 281840 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00027 K18757 - gmx:100785504 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g00027 1 276992 281840 Phac1g00027 1 276992 281840 ECH