Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00025 ATGGCTGCAACAACACCGAATCACACTGTAACTGTATCTGGGTGGGCAGCACACGATACTTCCGGCAAGATTAGCCCCTACACCTTCAAAAGAAGGGAGAATGGTGCCAACGATGTAACCATAAAGATCTTGTACTGTGGGATCTGCCACACTGATCTACACTATGCTAAAAATGAATGGGGCGTCACCATCTACCCTGTGGTACCAGGGCACGAGATCATTGGGGTGGTGACTGAGACAGGAAGCGATGTGAAGGGGTTCAAGGAAGGAGACAGAGTGGGTGTGGGGTGTATGGCAGCTTCATGTTTGGATTGTGAATACTGCAAGACCGATCAGGAAAACTACTGTGAGAAGATGGTACTTGTGTACAACGCAATCTTCTGGGATGGCAGCATCACCTACGGTGGCTACTCCCAACTCATTGTTGCAGATCACAGGTATGTGGTACACATTCCGGAGAACCTACCAATGGATGCGGCGGCTCCTCTACTGTGCGCCGGAATAACAGTGTTCAGTCCTTTGAAAGATCACGATCTGGTGGCGACGGGGGGGAAAAAGATTGGGGTGGTTGGTTTGGGAGGGCTGGGACACTTAGCCGTTAAATTTGGGAAGGCATTTGGGCACCACGTTACTGTGATTAGCACTTCTCCTTCGAAAGAGGAAGAAGCTAAGCAACGTTTGGGTGCTGATGATTTCATAATCAGCACAAACCCTGAACAGTTAGAGAAAGGAAAGAGAAGCCTTGATTTCATACTGGACACTGTTTCTGCAGAGCACCCTCTCTCACCCATCTTGGAATTGCTGAAAGTCAACGGCACCTTGTTTCTGGTTGGAGCACCCGACAAGCCCCTGCAGCTGCCTGCTTTTCCATTGATTATGGGGAAGAGAGCAGTAAAAGGTGGGATCATAGGAGGAATAAAAGAGACTCAGGAAATGTTGGATGTGTGTGCCAAGTACAACATAACGAGTGACATTGAGTTGATCACAGCAGATAGAATCAACGAAGCCATTGAACGTCTTGCCAAGAATGATGTTCGCTACCGTTTCGTGATTGACATTGGTGCAGCTTCCAAGGAGTAG 1080 0.4843 MAATTPNHTVTVSGWAAHDTSGKISPYTFKRRENGANDVTIKILYCGICHTDLHYAKNEWGVTIYPVVPGHEIIGVVTETGSDVKGFKEGDRVGVGCMAASCLDCEYCKTDQENYCEKMVLVYNAIFWDGSITYGGYSQLIVADHRYVVHIPENLPMDAAAPLLCAGITVFSPLKDHDLVATGGKKIGVVGLGGLGHLAVKFGKAFGHHVTVISTSPSKEEEAKQRLGADDFIISTNPEQLEKGKRSLDFILDTVSAEHPLSPILELLKVNGTLFLVGAPDKPLQLPAFPLIMGKRAVKGGIIGGIKETQEMLDVCAKYNITSDIELITADRINEAIERLAKNDVRYRFVIDIGAASKE* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00025 359 Gene3D - 15 353 - -
Phac1g00025 359 CDD CAD1 14 352 IPR047109 GO:0016616
Phac1g00025 359 SUPERFAMILY GroES-like 18 183 IPR011032 -
Phac1g00025 359 FunFam Cinnamyl alcohol dehydrogenase 166 323 - -
Phac1g00025 359 Gene3D - 166 323 - -
Phac1g00025 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Phac1g00025 359 FunFam probable cinnamyl alcohol dehydrogenase 15 173 - -
Phac1g00025 359 SMART PKS_ER_names_mod 19 351 IPR020843 GO:0016491
Phac1g00025 359 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Phac1g00025 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Phac1g00025 359 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Phac1g00025 359 PANTHER ALDEHYDE REDUCTASE 7 354 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00025 Phac-Chr1 269729 271718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00025 14 356 Monolignol Biosynthesis Gene Families AT2G21730 58.721 2.49e-146 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00025 K00083 - gmx:100820588 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g00025 1 269729 271718 Phac1g00025 1 269729 271718 ECH