Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00013 ATGAGAATCATGGGAGTGGGGTTCTCAAAGGTGTTAACACACACCCCAGATGATGAAATTCCAATTTCTTCCACAGATTCTGCTCCTCAACTCACCTACAAACAACCTCGGAAAAACCTCCCTGTTCCACCTCAGTTTCCTCCTCCCATGCCAACACTATGTTCTTCACCAACAGAACCTGTTCTGGGGAAGCCTTACGTTAAAATAAAGCAGATGTACGAGATGAAGAAGGAGCTGGGAAGAGGCAACTTTGGTGTGACTTATCTGTGTGTGGAGAAGGCCACAGGAATTGCCTATGCATGCAAATCCATATCAAAGAAGGGGCCACAAGAAGTTAAGAATCTTAGAAGAGAAGTTATGATTCTGCAGCATCTTTCAGGGCAACATAACATAGTGGAATTCAAGGGAGCTTATGAGGACAGGGAGAAGGTGCATGTTGTGATGGAGTTGTGCAGTGGAGGTGAACTCTTTCACCGTATCATTGCCAAAGGTAGACACTCCGAGCGTGATGCAGCCACAGTTATGAGACAGATTGTGAGGGTTGTTGACGTGTGCCATTTCATGGGTGTGATGCATCGAGACCTCAAGCCAGAGAATTTCTTGTTCGCCACCAAGGACCAGGATTCCCCTTTGAAACTCACGGATTTTGGATTCTCTGTCTTCTTTCACACTGGTGAGGTGCATACAGATATTGTTGGAAATGCATGTTACGTAGCTCCAGAGGTTTTGAAACGGAATTATGGAAAGGAGATAGATGTTTGGAATGCAGGAGTCATTTTATACATCCTCTTAAGTGGGGTGCCTCCATTTTCGGCTGGTTCAGAAACCGAGAAAGGCGAGTTAGTTGATGCTTTGGGTGAACATCCGTGGTTGAAAGAAGGTGGTGAAGCATCAGAAAAGCATCCAGACAGTGCTGTTTTAATTAGGATGGAACGGTTCAAAGCAATGAACCAGATGAAGAAGCTTGCCTTGAAGGTAATAGCAGAAAACCTTTCAGAGGAAGAAACAAAGGGCCTGAGACAAATGTTCAACAGCATGGATACTGATGGCAGTGGCACTATCACATTTGAAGAACTCAAAGCTGGATTATCCAGATTGGATTCCCTGCTTAGTGAATCTGAAATAAGGCAGCTATTGAATGCTATTGGTAATGACAAAAATGGAACAATTAAATACTGTGAATTCGTTGCTGCCACCATGGATCCACATAAAATGGAGAAGGGGGAGAATTTGTTCAAGGCTTTTCAATACTTTGACAAGGATGACAAGGGTTATATAACGGGAAATGAAATTAGGGAAGCTATCACTGAACACCAAATGGGAGAAGAAGCTGCGATAGATGAAGTCTTCGAGGATGTAGACTCAGATAAAGATGGGAAAATTAATTATGAGGAGTTTATGTGCATGATGAGAAACGAATGCTGA 1425 0.433 MRIMGVGFSKVLTHTPDDEIPISSTDSAPQLTYKQPRKNLPVPPQFPPPMPTLCSSPTEPVLGKPYVKIKQMYEMKKELGRGNFGVTYLCVEKATGIAYACKSISKKGPQEVKNLRREVMILQHLSGQHNIVEFKGAYEDREKVHVVMELCSGGELFHRIIAKGRHSERDAATVMRQIVRVVDVCHFMGVMHRDLKPENFLFATKDQDSPLKLTDFGFSVFFHTGEVHTDIVGNACYVAPEVLKRNYGKEIDVWNAGVILYILLSGVPPFSAGSETEKGELVDALGEHPWLKEGGEASEKHPDSAVLIRMERFKAMNQMKKLALKVIAENLSEEETKGLRQMFNSMDTDGSGTITFEELKAGLSRLDSLLSESEIRQLLNAIGNDKNGTIKYCEFVAATMDPHKMEKGENLFKAFQYFDKDDKGYITGNEIREAITEHQMGEEAAIDEVFEDVDSDKDGKINYEEFMCMMRNEC* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00013 474 SMART efh_1 374 402 IPR002048 GO:0005509
Phac1g00013 474 SMART efh_1 338 366 IPR002048 GO:0005509
Phac1g00013 474 SMART efh_1 445 473 IPR002048 GO:0005509
Phac1g00013 474 SMART efh_1 410 438 IPR002048 GO:0005509
Phac1g00013 474 ProSiteProfiles EF-hand calcium-binding domain profile. 406 440 IPR002048 GO:0005509
Phac1g00013 474 ProSiteProfiles EF-hand calcium-binding domain profile. 441 474 IPR002048 GO:0005509
Phac1g00013 474 SMART serkin_6 73 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00013 474 MobiDBLite consensus disorder prediction 18 34 - -
Phac1g00013 474 CDD STKc_CAMK 73 277 - -
Phac1g00013 474 PANTHER SERINE/THREONINE-PROTEIN KINASE 284 466 - -
Phac1g00013 474 ProSiteProfiles EF-hand calcium-binding domain profile. 334 369 IPR002048 GO:0005509
Phac1g00013 474 MobiDBLite consensus disorder prediction 17 42 - -
Phac1g00013 474 Pfam Protein kinase domain 73 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00013 474 FunFam Calmodulin A 328 473 - -
Phac1g00013 474 SUPERFAMILY Protein kinase-like (PK-like) 73 284 IPR011009 -
Phac1g00013 474 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Phac1g00013 474 ProSitePatterns EF-hand calcium-binding domain. 454 466 IPR018247 -
Phac1g00013 474 Gene3D Transferase(Phosphotransferase) domain 1 156 297 - -
Phac1g00013 474 Gene3D Phosphorylase Kinase; domain 1 75 155 - -
Phac1g00013 474 Gene3D - 309 400 - -
Phac1g00013 474 Pfam EF-hand domain pair 410 471 IPR002048 GO:0005509
Phac1g00013 474 Pfam EF-hand domain pair 339 399 IPR002048 GO:0005509
Phac1g00013 474 FunFam Aurora kinase A 66 154 - -
Phac1g00013 474 ProSiteProfiles Protein kinase domain profile. 73 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00013 474 SUPERFAMILY EF-hand 330 470 IPR011992 -
Phac1g00013 474 FunFam Maternal embryonic leucine zipper kinase 63 282 - -
Phac1g00013 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Phac1g00013 474 Gene3D - 317 470 - -
Phac1g00013 474 ProSitePatterns EF-hand calcium-binding domain. 347 359 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00013 Phac-Chr1 217065 220632 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00013 55 472 EF-hand Containing Proteins AT3G20410 56.399 0.0 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phac1g00013 Pkinase 1.5e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00013 K13412 - gmx:100792610 697.197