Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00012 ATGGGGTTGGGGTTGTTTAAGGCGTTGTTTTGCTGCAGCAAGGCCCGTGAAATAGAAATCATGGAGTCATGGGAGTCTTCTCCGGAGCATAGCTCGAAAGAAGATAGTGGAAAAAGAAAAGCAGCATCTAATACAGGTGTTGGTGAGAAAAAGAGTAGCAAGCCACAGACGGGAGCTATTCTGGGAAAACCGTACGTGAAGATAGACCAAATTTACGAGATGAAGAAAGAGCTGGGAAGTGGGCAATGGGGTGTGACATATCTGTGCGTGGAGAAGACAACGCAGAGAGAGTACGCATGCAAGTCGATTGCGAAGTCGAAGCTTTTGAGTGAGCAGGAGATTGAGGACGTGAGAAGAGAGGTTATGATTCTGCAGCATCTTTCTGGGCAACCCAACATTGTGGAGTTCAGAGGGGCTTACGAGGACAGAACGCAGGTGCACCTGGTGATGGAGCTCTGCAGTGGCGGCGAACTCTTCGACCGCATCATTGCCAAAGGGAACTACTCCGAGCGTGAGGCGGCAGCCGTCACGAGGCAGATCGTGAACGCCGTTCACGTCTGCCATTTCATGGGCGTCATGCATCGAGACCTCAAACCGGAAAATTTCTTGCTAGCCACCAACGCAGACGATGCTCCCGTCAAAACCACCGATTTTGGACTCTCCATTTTCATCGAGGAAGAACCTGAAAATCTCACACATCAATCAGAATCTCTCCACAAAGAAACGTTATTTATCCACATGGGCTTCTGCTTCAGCAAACCCCGCAGCAACGAAATAACAATCAACTATGATTCACCACCCCCTCATCGTTATCACCCTCGTCCACGCCCTCCAACAACCCAACAACCTCATCTTCAACCTCGTTATCCAAACTCAGACCCTTCTATTTCCATCGCCCCTTCATCATCATTCGGTGATCCGTCACGAATTCTAGAGAAACCATACTTCGACATTAAAGCGCTTTACACGCTGGAGAGGGAACTGGGGAGGGGTCAATTCGGGATCACTCGTCTCTGTACCGAGAAGACCACTGGAAGGAAATACGCCTGCAAGTCCATTTCAAAGCGGAGGCTAACCAAAAAGAAGCAAATGGACGATGTGAAGAGGGAAATTCTGATCCTGCAGCACCTTTCGGGTCAACCCAACATCGTTGAGTTCAAGGGTGCTTACGAGGATTTGCAGAACGTGCATTTGGTGATGGAGTTGTGTTTGGGTGGCGAGCTTTTCGATCGCATCACTGCAAAGGGTAGTTACTCCGAGAGTGAAGCTGCTTCCATATTCAGACAAATCGTGAATGTGGTTCATGCATGTCACTTCATGGGGGTCATGCATAGAGACCTTAAGCCAGAAAATTTCTTGCTTGCTAATAAGGATCCTAAGGCACCCTTGAAAGCCACCGATTTTGGATTGTCCGTGTTCATTGAAGAAGATAAAGTGTATAGGGAGCTTGTTGGAAGTGCGTACTACGTGGCCCCAGAGGTGTTACAAAAGAGTTATGGAAAAGAAATAGATGTGTGGAGTGCAGGAATCATTTTATACATCCTTCTAAGTGGAGTGCCTCCTTTTTGGGCTGAAACCGAGAGAGGCATATTTGATTCAATTTTGGAAGGCAAACTTGATCTGGAGAACGCACCATGGCCTTCTATTTCAGCTGCTGCAAAGGATTTGATAAGGAAAATGTTGACCCGTGACCCTAAGAAACGCATTACAGCTGCTGAAGCACTTGAACACCCTTGGATGAAGGAGGGTGGTGAAGCATCTGACAAGCCTATAGACAATGCTGTTTTGAGTAGGATGAAACAGTTCAGAGCAATGAACAAGATGAAGAAACTTGCTTTAAAGGTTATAGCAGAAAACCTTTCAGAGGAGGAAATCAAGGGGTTGAAACAAATGTTCAACAATATGGACACTGATCGCAGTGGCACAATCACATATGAGGAACTCAAATCTGGATTAACCAAATTGGGATCCAAGCTTAGTGAATACGAAATAAAGCAGCTAATGGAAGCTGCTGATGTTGACAAGAATGGAACTATTGACTATCAAGAGTTCATCACTGCCACTATAAACCGGCATAAACTGGAAAAGGAAGAGAATTTGTACAAGGCTTTTCAATACTTTGACAAGGATGACAGTGGATATATAACAAGAGAAGAGCTTAGACAAGCATTGACTGAATATCAGATGGGAGATGAGGCAACTATAGATGAAGTCATCAATGATGTGGATACTGATAACGATGGGAAAATAAATTACCAGGAGTTTGTGGCAATGATGAGAAAGGGGATTCTGGATATTGATGAGAAGGAGAAACCACGATAG 2322 0.4561 MGLGLFKALFCCSKAREIEIMESWESSPEHSSKEDSGKRKAASNTGVGEKKSSKPQTGAILGKPYVKIDQIYEMKKELGSGQWGVTYLCVEKTTQREYACKSIAKSKLLSEQEIEDVRREVMILQHLSGQPNIVEFRGAYEDRTQVHLVMELCSGGELFDRIIAKGNYSEREAAAVTRQIVNAVHVCHFMGVMHRDLKPENFLLATNADDAPVKTTDFGLSIFIEEEPENLTHQSESLHKETLFIHMGFCFSKPRSNEITINYDSPPPHRYHPRPRPPTTQQPHLQPRYPNSDPSISIAPSSSFGDPSRILEKPYFDIKALYTLERELGRGQFGITRLCTEKTTGRKYACKSISKRRLTKKKQMDDVKREILILQHLSGQPNIVEFKGAYEDLQNVHLVMELCLGGELFDRITAKGSYSESEAASIFRQIVNVVHACHFMGVMHRDLKPENFLLANKDPKAPLKATDFGLSVFIEEDKVYRELVGSAYYVAPEVLQKSYGKEIDVWSAGIILYILLSGVPPFWAETERGIFDSILEGKLDLENAPWPSISAAAKDLIRKMLTRDPKKRITAAEALEHPWMKEGGEASDKPIDNAVLSRMKQFRAMNKMKKLALKVIAENLSEEEIKGLKQMFNNMDTDRSGTITYEELKSGLTKLGSKLSEYEIKQLMEAADVDKNGTIDYQEFITATINRHKLEKEENLYKAFQYFDKDDSGYITREELRQALTEYQMGDEATIDEVINDVDTDNDGKINYQEFVAMMRKGILDIDEKEKPR* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00012 773 ProSitePatterns EF-hand calcium-binding domain. 708 720 IPR018247 -
Phac1g00012 773 ProSiteProfiles Protein kinase domain profile. 72 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00012 773 Gene3D Transferase(Phosphotransferase) domain 1 159 255 - -
Phac1g00012 773 FunFam calcium-dependent protein kinase 1 408 587 - -
Phac1g00012 773 ProSiteProfiles EF-hand calcium-binding domain profile. 695 730 IPR002048 GO:0005509
Phac1g00012 773 ProSiteProfiles Protein kinase domain profile. 322 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00012 773 CDD STKc_CAMK 322 579 - -
Phac1g00012 773 MobiDBLite consensus disorder prediction 23 40 - -
Phac1g00012 773 SUPERFAMILY Protein kinase-like (PK-like) 322 587 IPR011009 -
Phac1g00012 773 Gene3D Phosphorylase Kinase; domain 1 74 158 - -
Phac1g00012 773 Gene3D Phosphorylase Kinase; domain 1 324 407 - -
Phac1g00012 773 Pfam Protein kinase domain 72 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00012 773 Pfam Protein kinase domain 322 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00012 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Phac1g00012 773 MobiDBLite consensus disorder prediction 285 303 - -
Phac1g00012 773 ProSiteProfiles EF-hand calcium-binding domain profile. 731 765 IPR002048 GO:0005509
Phac1g00012 773 MobiDBLite consensus disorder prediction 23 58 - -
Phac1g00012 773 ProSiteProfiles EF-hand calcium-binding domain profile. 623 658 IPR002048 GO:0005509
Phac1g00012 773 SMART efh_1 663 691 IPR002048 GO:0005509
Phac1g00012 773 SMART efh_1 627 655 IPR002048 GO:0005509
Phac1g00012 773 SMART efh_1 699 727 IPR002048 GO:0005509
Phac1g00012 773 SMART efh_1 734 762 IPR002048 GO:0005509
Phac1g00012 773 FunFam Calcium-dependent protein kinase 1 324 407 - -
Phac1g00012 773 ProSitePatterns EF-hand calcium-binding domain. 672 684 IPR018247 -
Phac1g00012 773 MobiDBLite consensus disorder prediction 261 303 - -
Phac1g00012 773 ProSitePatterns Protein kinases ATP-binding region signature. 328 351 IPR017441 GO:0005524
Phac1g00012 773 SUPERFAMILY Protein kinase-like (PK-like) 72 228 IPR011009 -
Phac1g00012 773 Pfam EF-hand domain pair 697 760 IPR002048 GO:0005509
Phac1g00012 773 Pfam EF-hand domain pair 628 688 IPR002048 GO:0005509
Phac1g00012 773 FunFam Calcium-dependent protein kinase 1 588 763 - -
Phac1g00012 773 ProSitePatterns EF-hand calcium-binding domain. 636 648 IPR018247 -
Phac1g00012 773 Gene3D Transferase(Phosphotransferase) domain 1 408 587 - -
Phac1g00012 773 PANTHER SERINE/THREONINE-PROTEIN KINASE 318 755 - -
Phac1g00012 773 Gene3D - 588 762 - -
Phac1g00012 773 SUPERFAMILY EF-hand 619 760 IPR011992 -
Phac1g00012 773 ProSitePatterns EF-hand calcium-binding domain. 743 755 IPR018247 -
Phac1g00012 773 ProSiteProfiles EF-hand calcium-binding domain profile. 659 694 IPR002048 GO:0005509
Phac1g00012 773 FunFam Calcium-dependent protein kinase 1 74 157 - -
Phac1g00012 773 SMART serkin_6 322 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00012 773 SMART serkin_6 72 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00012 Phac-Chr1 211317 216326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00012 247 762 EF-hand Containing Proteins AT3G20410 67.784 0.0 742
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phac1g00012 Pkinase 2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00012 K13412 - gmx:100816157 789.26