Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02854 ATGGAAAGAGAGTTGGAGAGAGGGTATGTGAAGAAGGGGCCATGGAGTAGAGAGGAAGATGAAGTGCTTCTGAGACATGTCAGAAAGTATGGTCCAAGGGAGTGGAGCTCCATTCGATCCAAAGGCTTGTTGCCAAGAACAGGAAAATCTTGTCGCCTTAGATGGGTTAACAAACTTAGACCAAACTTGAAGACTGGATGCAAGTTTACGGCAGAAGAAGAGAGACTGGTGATAGAGTTACAGGCACAGTTTGGGAACAAATGGGCGAAAATTGCAACGTATTTGCCAGGGAGAACGGACAATGATGTGAAAAACTTTTGGAGCAGTAGGAGAAAAAGGTTGGAGAGGATGTTGCAGAAGCCACCAACGTTAAAGCTGCAGAAAAACAAGGGAAAAACTCCTCTTACTCCACTGCTAGTGGATAAGGCTCCTCCATGCAGTTCAAATGAGGTGGAGGAAAACCTTTCTTGCCCTACTTCGTACATGGGAAACACTGATGTGTTCGAGATTATCAACCTTCCAGATTTGATGAAGCCAAACTATCAGCAGTTGAAAAATGATTACTTGAGTGCAGTTGAGGTTGAGGCCACCCCACTTCACACAGTACCATCGTTTGAGTCTTCATCGGGGTATAACTTCCCTCTACTCCCTGATCCACTAATCGACTTTCCAGTGTTCCCAGAGTACCAGGACCTTGTTCCAGAGTCCTTTGATCCAAATTTTATGGAAGGGTTCGAGGAGAATAAATGTTCAGAATGTGTGTGCAGCCAGAAGCTTGGGACTGGGTTGTTGCCAACTCTTGGATTGGAGGAAAATTCTCAAATTACAACTTCAAATGGCTTATTTAAGGACTTCCCAAATGAGATTTTTGAATACTTTGAGCACAATCCAACCTCAACAGAACAATGA 909 0.44 MERELERGYVKKGPWSREEDEVLLRHVRKYGPREWSSIRSKGLLPRTGKSCRLRWVNKLRPNLKTGCKFTAEEERLVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRRKRLERMLQKPPTLKLQKNKGKTPLTPLLVDKAPPCSSNEVEENLSCPTSYMGNTDVFEIINLPDLMKPNYQQLKNDYLSAVEVEATPLHTVPSFESSSGYNFPLLPDPLIDFPVFPEYQDLVPESFDPNFMEGFEENKCSECVCSQKLGTGLLPTLGLEENSQITTSNGLFKDFPNEIFEYFEHNPTSTEQ* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02854 302 FunFam MYB transcription factor 12 64 - -
Phac11g02854 302 ProSiteProfiles Myb-like domain profile. 7 59 IPR001005 -
Phac11g02854 302 SMART sant 11 61 IPR001005 -
Phac11g02854 302 SMART sant 65 113 IPR001005 -
Phac11g02854 302 FunFam Transcription factor GAMYB 67 135 - -
Phac11g02854 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 55 IPR017930 -
Phac11g02854 302 ProSiteProfiles Myb-like domain profile. 68 111 IPR001005 -
Phac11g02854 302 CDD SANT 68 107 IPR001005 -
Phac11g02854 302 CDD SANT 14 59 IPR001005 -
Phac11g02854 302 Pfam Myb-like DNA-binding domain 68 108 IPR001005 -
Phac11g02854 302 Gene3D - 67 135 - -
Phac11g02854 302 Pfam Myb-like DNA-binding domain 15 65 - -
Phac11g02854 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 115 IPR017930 -
Phac11g02854 302 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Phac11g02854 302 PANTHER TRANSCRIPTION FACTOR DUO1 5 301 - -
Phac11g02854 302 Gene3D - 5 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02854 Phac-Chr11 40079475 40081292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02854 4 119 MYB Transcription Factor Family AT3G60460 78.448 5.90e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac11g02854 Myb_DNA-bind_6 2.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02854 K09422 - gmx:121173231 482.256