Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02831 ATGAGCATGGTGTATAGTCATGGAGTGAAGTATTCCCAAGGAGTGACAAAGATGAACTCAGAGATGGATTCAAATATTGGTCAACAACATTGTCACCAACAAAATTCTGGGCTAATGAGGTACCGTTCTGCTCCAAGCTCATTGCTCACAAGCCTTGTGAACAGCAGCAGCAACATCAACATCAACAACAACATTGGATGTGTCAATGGTGAGACTCAGCAGCAGCAGAATTATCCTCCCTCCACAAGTTCTGAAATGGAGACCATGTTGGCCAAGTTGATTTCTTCCAATGATTCTGAGCCTTTGCAAGAGTTTGAAGGGAAGCCAGTGAAGGAAGAAGCAGGGGACACTGTTCCACAGCCACCACAACAGCACAATGGTTACTCTTTCGGGTCTTCACCTCAGATAATGTACCAAACTCAGCAAGTTCAAGGCTTTCCCATGCCAAATGGTTCTTTAAGGTCTGCAGGGAATGGTTTTGATGGCTCATTCAGTGCAGTGAATTCCATGGCTTCTCAGAATTCCACACAAACCAAAAGGGGTGCTTCCACCAATTGCTCCAATCTCATTAGGCAAAAGAGTTCCCCTGCAGGGTTTTTCTCCAATTACTCAGTTGATAATGCACTGAGAGATATGGCTAGTTTTAGGGGCTGTGATGTATCAAATGGACAAGCTATTACATCCACTAGTGGGTTGCATGGTACTTTGAACTTCTCATCAAGGTCATCCTCTTGCTCCACCAGGATGCCACAGATTGCTGAAAATGGAAATGAAGGTGTGGAACCAAATTGTGTTGAAAGTAGAAACCTGAGGAATGACAATGACAACACTAAGTGTTACATGCCTAGTTTCACCACTGACTTCTGGGATGGTTCTGTAATCAGTGCCCCCAGAACAGCTAGCAACAATTGTGAAATATCATTTTCCACTTCAAATGCAATGGATATTCAGGATGCAGATTTTGGATATCAAAAAGTTGGTCTGACCCATCATTTGAGTCTGCCTAGCTCTTCTAGTAGAATGGCTACCATGGAGAAGTTATATCAAACTCAAGGAGTTGTTCCATGCAAAATTCGTGCCAAGAGAGGTTTTGCCACTCACCCAAGAAGCATTGCTGAAAGGGAAAGAAGAACTAGAATTAGTGCAAGAATCAAGAAATTGCAGGACCTTTTCCCAAAATCAGACAAGCAAACAAGCACATCTGATATGTTGGATTTGGCAGTTGAGTACATTAAAGACCTGCAGAAACAAGTCAAGATGCTGGCTGACACTAAGGAAAAGTGCACTTGTACAAGTAATCACAAGCAGTATTCTAGACCTTTTGCCTGA 1329 0.4289 MSMVYSHGVKYSQGVTKMNSEMDSNIGQQHCHQQNSGLMRYRSAPSSLLTSLVNSSSNININNNIGCVNGETQQQQNYPPSTSSEMETMLAKLISSNDSEPLQEFEGKPVKEEAGDTVPQPPQQHNGYSFGSSPQIMYQTQQVQGFPMPNGSLRSAGNGFDGSFSAVNSMASQNSTQTKRGASTNCSNLIRQKSSPAGFFSNYSVDNALRDMASFRGCDVSNGQAITSTSGLHGTLNFSSRSSSCSTRMPQIAENGNEGVEPNCVESRNLRNDNDNTKCYMPSFTTDFWDGSVISAPRTASNNCEISFSTSNAMDIQDADFGYQKVGLTHHLSLPSSSSRMATMEKLYQTQGVVPCKIRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKSDKQTSTSDMLDLAVEYIKDLQKQVKMLADTKEKCTCTSNHKQYSRPFA* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02831 442 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 44 434 - -
Phac11g02831 442 MobiDBLite consensus disorder prediction 98 132 - -
Phac11g02831 442 SMART finulus 370 420 IPR011598 GO:0046983
Phac11g02831 442 FunFam Transcription factor bHLH130 family 365 434 - -
Phac11g02831 442 Gene3D - 366 437 IPR036638 GO:0046983
Phac11g02831 442 Pfam Helix-loop-helix DNA-binding domain 370 415 IPR011598 GO:0046983
Phac11g02831 442 CDD bHLH_AtbHLH_like 369 421 IPR045239 -
Phac11g02831 442 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 364 414 IPR011598 GO:0046983
Phac11g02831 442 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 367 429 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02831 Phac-Chr11 39766472 39770532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02831 22 420 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 34.856 1.33e-44 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac11g02831 HLH 3.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02831 - - gmx:100795896 680.248