Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02805 ATGCGGAGGTGGTGCGTCTTCTCTGAACGAGTGCGGCGGTGGTGGCGATCGAGCGGAGCAGGTCGCGCGGTGGTGACAATAGGGCAGAGGACGTCGCGCGGTAGTGGCGGTTCGTGCGGTGGTTGCAGGTTGCGGACCCGCACCGAATACCGGTGCATTGCAAGGGTGCAGAAACCAGTAACGGTACCATTTAGCATCAGAAAGAAGGCTGCGCCGGCGACTGCGACTGCGCCTGCGACTGCGACTGCGCCTGCGACTGCGACTGCGCCTGCCACTGCGACTGCGCCGGCGACTGCGACTGCGACTGCGCCTGCGATTTCGAACATGCAAATGAAGTTTGTGGTGAAGAAGGCATGCTGCGGCGGTGGTCGGGTAGGAGCACTAGAGATGGGAAGCTGCCCGAAACCGGTGGAGACCCCAGCTCTTCTCCTATCCACTCGTAAAGGGCTTCCACATTTTATCGCCCCTGACCTACTCACTTCTCTCCCTTTTCCTGATTCCCATCTCCTTCAAGCTTCTCCACTCCACTTTTTGGAAGGTCTTGCTTCGACCACAATATCAAAAATTGGAGGCCTTCACCAGCTGCTTGGTTTGCACCAATATGGAATTGCGGCGGTACCCAGAGATTCCATCCAATGCCTTCCTGAGTCTAAGGGAGCTACCAAACTCGGAGCATCTTTTGAGACTCCTTGTGGTCGTCTGTTGATTAAACCCAAAGATTATGTTGAAATGATTTCATGCATGAGGCCAAATATATGGGCCACTTTGGCAGATGAGGTACCTGCTTGGGTGTCTGATAAAAGGAACAAAACCTCAGTAGATAGAACTGTGCGATGGCTTGACGATTGCCTTGCATTAAATCCGGCAGCTGGGTCAGTCTTTGGTGCTATTGTTGGAGGCCCAAATTTGGATGAAAGGAAGCGATGTGCAGTGGAGGTGGCCAAGCGAAATGTTTCAGGTTATTGGATTGGAGGATTTGGTCTAGGCGAGGGCATTGAAGAACGAGGTGCTCTTCTAAGTGCTGTTACAGATGTCTTGCCGGATGAAAAACCACGCATGATCAGTGGGCTTGGGCTCCCAGAGGAGATCTTGGAAGGAATTGAAGCTGGGATTGATCTTTTTGATTCAACGTTAGTGGCTAATTCCAATTTTCATTTGCTCAATATCCCTAATTTCTTGATCTATTGTGTTATGGAATTTGGATGGTTTTCTGTGATGGTTCATAGGTACATATATTCCCTCACACTTGGAGGATTTGCACTAACGTTTTCACTAGACAAGGGTGGAGATCAATATGATTTTCAGAAATGCCAGATGGAAAGGGACTTGACTAAAATCAATTTGAGAGCAAAAGTTTACAGGAAAGATATGTCCCCAATTTTAGGAAACTGCACCTGCTATACATGCCAGAATCATACTAAAGCATACATCAATCACTTATTTAATGTTCATGAAATGCTGGCACAGACTCTGCTAGAAATCCATAATACACACCACTACCTGATGTTCTTTCGCATAATAAGAGAAGCAATAAAGGACGGAAGATTTAAGAAATTTCGACTGACATTTATCGAGAGCAGGCGTGTACATCAGGAAACGGAAGCTGTATGTGCTTGA 1617 0.483 MRRWCVFSERVRRWWRSSGAGRAVVTIGQRTSRGSGGSCGGCRLRTRTEYRCIARVQKPVTVPFSIRKKAAPATATAPATATAPATATAPATATAPATATATAPAISNMQMKFVVKKACCGGGRVGALEMGSCPKPVETPALLLSTRKGLPHFIAPDLLTSLPFPDSHLLQASPLHFLEGLASTTISKIGGLHQLLGLHQYGIAAVPRDSIQCLPESKGATKLGASFETPCGRLLIKPKDYVEMISCMRPNIWATLADEVPAWVSDKRNKTSVDRTVRWLDDCLALNPAAGSVFGAIVGGPNLDERKRCAVEVAKRNVSGYWIGGFGLGEGIEERGALLSAVTDVLPDEKPRMISGLGLPEEILEGIEAGIDLFDSTLVANSNFHLLNIPNFLIYCVMEFGWFSVMVHRYIYSLTLGGFALTFSLDKGGDQYDFQKCQMERDLTKINLRAKVYRKDMSPILGNCTCYTCQNHTKAYINHLFNVHEMLAQTLLEIHNTHHYLMFFRIIREAIKDGRFKKFRLTFIESRRVHQETEAVCA* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02805 538 NCBIfam tRNA-guanine transglycosylase 120 380 IPR002616 GO:0006400|GO:0016763
Phac11g02805 538 NCBIfam tRNA-guanine transglycosylase 445 526 IPR002616 GO:0006400|GO:0016763
Phac11g02805 538 MobiDBLite consensus disorder prediction 73 96 - -
Phac11g02805 538 Pfam Queuine tRNA-ribosyltransferase 122 527 IPR002616 GO:0006400|GO:0016763
Phac11g02805 538 SUPERFAMILY tRNA-guanine transglycosylase 109 526 IPR036511 GO:0006400|GO:0016763
Phac11g02805 538 Hamap Queuine tRNA-ribosyltransferase accessory subunit 2 [QTRT2]. 135 522 IPR028592 GO:0006400|GO:0008479
Phac11g02805 538 MobiDBLite consensus disorder prediction 79 96 - -
Phac11g02805 538 Gene3D - 108 528 IPR036511 GO:0006400|GO:0016763
Phac11g02805 538 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE ACCESSORY SUBUNIT 2 111 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02805 Phac-Chr11 39446591 39450959 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02805 K15407 - gmx:100778880 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01997 5 39941823 39946251 Phac11g02805 11 39446591 39450959 PCT