Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02781 ATGTCTGAAGGCTATTCCTGTGGCTGCTCCGACTCCGACTCTTCCTGCGGCTGTTGGTCTACCGCCGCCACCGCCGCCGCCGCCACCAGATCTGAGGCTTCAACCGAACTCAGACTCTACAGAGCCTTCATCTTCTGTGTCCCCATCTTCTTCACTCTCATTCTCCTCTTTCTCTTCTACCTCTTCTACCTCCGACCGCGAACCAGGCTCCATTGGATCACCCACTTTGGTCTTCCTAACAACCACGACGACCACCACCACCACAATGCCATCTCCACTGCTGAGTTGGGCTTGAACAAAGAACACAGAGAGATGCTGCCAGTTATTGTCTACAAGGAAAGCTTCTCTGTTAAAGATACCCAATGCTCAGTATGCCTCTTGGACTACCAGTCAGAGGATAGGCTTCAACAGATACCTGCATGTGGCCACACATTTCATATGGGCTGCATTGATCTTTGGCTTGCCACCCACACCACCTGCCCTCTCTGCCGCTTCTCCTTACTAACCATAGCTAAATCTTCGACACAAACATCTGATTTGCAGTCACAGAACAATGAAGAAACACAAGCCGTGGAAGCATCTGAATCAAGATCTACTATGCATATAGAAACCACTGTCCTCCGAAATGTCTCTGGAGAAGTTGCAATCAGCTCTCCCTGCATTGAAGTTGAAGGGCAAAATCAGCAACACAATCAATAA 699 0.4936 MSEGYSCGCSDSDSSCGCWSTAATAAAATRSEASTELRLYRAFIFCVPIFFTLILLFLFYLFYLRPRTRLHWITHFGLPNNHDDHHHHNAISTAELGLNKEHREMLPVIVYKESFSVKDTQCSVCLLDYQSEDRLQQIPACGHTFHMGCIDLWLATHTTCPLCRFSLLTIAKSSTQTSDLQSQNNEETQAVEASESRSTMHIETTVLRNVSGEVAISSPCIEVEGQNQQHNQ* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02781 232 FunFam RING-H2 finger protein ATL7 88 169 - -
Phac11g02781 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 169 IPR013083 -
Phac11g02781 232 ProSiteProfiles Zinc finger RING-type profile. 122 164 IPR001841 -
Phac11g02781 232 SMART ring_2 122 163 IPR001841 -
Phac11g02781 232 SUPERFAMILY RING/U-box 106 170 - -
Phac11g02781 232 PANTHER RING-H2 FINGER PROTEIN ATL16 33 205 IPR044600 GO:0016567|GO:0016740
Phac11g02781 232 CDD RING-H2_EL5-like 121 164 - -
Phac11g02781 232 MobiDBLite consensus disorder prediction 176 198 - -
Phac11g02781 232 Pfam Ring finger domain 121 164 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02781 Phac-Chr11 39351807 39355733 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02781 27 194 C3H Transcription Factor Family AT4G10150 54.545 8.35e-58 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02781 K19039 - gmx:100794211 319.316