Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02775 ATGAAAACGCTAACAGTTAACACCGAAGATTCTTTTTCCAGCTTGCTAGAGCTTGCCTCTAACAATGATATTGAAGCTTTCAAGGTTCTTTTAGAGAAGGATCCTGCAGCAATCAACGAGGTTGGTTTCTGGTATGGGCGTCAAAACGGATCGAAGCAAATTGTTCTTGAGCATCGAACCCCTTTGATGGTTGCTGCTACCTACGGCAGCAATGATGTTCTCAAGCTTATTCTGATGTGCCCTGGGGTGGACGTGAATTTTGCTTGTGGGGCGAATAAAACCACCGCCCTTCACTGTGCTGCTTCTGGTGGATCTGCCAATGCTGTTGAAACTGTGAAGCTGCTTTTATCCGCAGGTGCTGATGCGAGTTGCATGGATGCCTTTGGGAATCGCCCTGTAGATGTGACTGTGGTTCCTCCTAAACTGCAAGAAATGAAACCTGTACTTGAGGAGCTTCTATCTGATAGTGCTTCCGATGGGTTTATTGGTGGGTCCATTGGTGAATTCTCTGTTCCTGTGTCTGTTAATTCATCCAGCCCCGGTTCCCCGAATGGATTGCCATACTCTCCGTCGGAGTCGCCACCATCTCCAGTGGTGGCAAAGTTTACTGAAGCAGCTATTGGCTCTTTCTCAGAGAAGAAGGAGTACCCCATTGATCCATCTCTGCCTGATATAAAGAACAGCATATACGCCACCGACGAGTTTCGGATGTTTTCCTTCAAGGTGAGGCCTTGTTCCCGTGCCTACTCCCATGATTGGACGGAGTGCCCATTTGTTCACCCTGGAGAGAATGCAAGGAGGAGAGACCCTAGGAAGTTCCATTACAGCTGTGTGCCGTGCCCTGATTTTAGGAAAGGGGCTTGTAGGCGTGGAGACATGTGTGAATATGCTCATGGGGTGTTTGAATGTTGGCTTCACCCAGCTCAGTATCGGACACGCCTTTGCAAAGATGGTACTGGTTGTAATCGAAGGGTGTGTTTTTTTGCTCACACTGCAGAGGAGCTGCGTCCACTCTATGCCTCCACTGGATCTGCCGTTCCTTCGCCACGATCATCGGCCTCTGGTCCTAATGTCATGGACATGGCCGCTGCGATGAGCCTTTTGCCGGGCTCGCCGTCGTCGGTCTCTTCCATGTCGCCGTCCCACTTTGGGCAACCCATGTCCCCATCTGCAAATGGCATGTCACTTTCCTCTGGTGCTTGGGCACAGCCAAACGTGCCAGCTCTTCATTTACCAGGAAGCAATCTTCAATCTAGCCGATTGAGGTCTTCCCTCAGTGCACGAGATATTCCACCCGAAGACTTCAATGGGATGCTTGATCTCGATGGCCACCAGCACCCTTTGAATGACTTGAGCTGTTACTTACAGCCTCGCCCCGGTGCTGGTTGTGTGAGTCGTTCCGCTAGGTCCAAGACTCTAACTCCAGCAAATCTGGAAGACCTCTTTTCTGCTGAGATTTCATCGTCCCCCCGGTATTCGGATCCAGCAGCGGCGTCTGTGTTTTCCCCAACCCACAAATCAGCTGTTCTCAATCAGTTTCAACAGATACAGAGCATGTTATCACCGATTAATACTAATTTGCTTTCTCCCAAGAGTGTTGACCATCCTCTTTTACAGGCCTCCTTTGGTGTCTCTCCTTCTGGAAGGATGTCACCAAGAAGTGTGGAACCAATCTCACCGATGAGCACACGCCTATCGGCGTTTGCTCAGCGCGAGAGACAGCAGCAGCAGCAGCTACAGCTGCGAAGTGTCAGTTCAAGGGACCTTGGTGCCAACAGTCCTGTCTCCATTGTTGGCTCCCCTGTAAACGCTTGGTCCAAATGGGGATCTCCCAACGGAAAAGTTGATTGGTCAGTAAATGGAGACGAGCTTGGTGGTCAGATGCGAAGATCATCCTCATTTGAGCTTAAGCACAACGGTGAAGAGCCTGATCTGTCATGGGTCCAGTCTCTGGTTAAGGAATCCCCACCTGAGATGATCAAGGAGAAGTTTGGTTCTCCTCTGCCTACAGCACCATCAGCGGATATGCCAAATTCTAATTCCCAAATTGAATCCATTGATCATTCCGTTTTAGGAGCCTGGCTTGAGCAAATGCAACTGGATCAGCTGGTAGTCTAG 2118 0.4995 MKTLTVNTEDSFSSLLELASNNDIEAFKVLLEKDPAAINEVGFWYGRQNGSKQIVLEHRTPLMVAATYGSNDVLKLILMCPGVDVNFACGANKTTALHCAASGGSANAVETVKLLLSAGADASCMDAFGNRPVDVTVVPPKLQEMKPVLEELLSDSASDGFIGGSIGEFSVPVSVNSSSPGSPNGLPYSPSESPPSPVVAKFTEAAIGSFSEKKEYPIDPSLPDIKNSIYATDEFRMFSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTGCNRRVCFFAHTAEELRPLYASTGSAVPSPRSSASGPNVMDMAAAMSLLPGSPSSVSSMSPSHFGQPMSPSANGMSLSSGAWAQPNVPALHLPGSNLQSSRLRSSLSARDIPPEDFNGMLDLDGHQHPLNDLSCYLQPRPGAGCVSRSARSKTLTPANLEDLFSAEISSSPRYSDPAAASVFSPTHKSAVLNQFQQIQSMLSPINTNLLSPKSVDHPLLQASFGVSPSGRMSPRSVEPISPMSTRLSAFAQRERQQQQQLQLRSVSSRDLGANSPVSIVGSPVNAWSKWGSPNGKVDWSVNGDELGGQMRRSSSFELKHNGEEPDLSWVQSLVKESPPEMIKEKFGSPLPTAPSADMPNSNSQIESIDHSVLGAWLEQMQLDQLVV* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02775 705 Gene3D - 274 337 - -
Phac11g02775 705 SMART c3hfinal6 274 300 IPR000571 GO:0046872
Phac11g02775 705 SMART c3hfinal6 309 332 IPR000571 GO:0046872
Phac11g02775 705 Gene3D - 3 154 IPR036770 -
Phac11g02775 705 MobiDBLite consensus disorder prediction 375 396 - -
Phac11g02775 705 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 279 299 IPR000571 GO:0046872
Phac11g02775 705 ProSiteProfiles Ankyrin repeat profile. 92 127 IPR002110 GO:0005515
Phac11g02775 705 FunFam Zinc finger CCCH domain-containing protein 66 232 300 - -
Phac11g02775 705 PANTHER UNKEMPT FAMILY MEMBER 17 655 IPR045234 -
Phac11g02775 705 SUPERFAMILY Ankyrin repeat 10 137 IPR036770 -
Phac11g02775 705 ProSiteProfiles Ankyrin repeat region circular profile. 92 126 - -
Phac11g02775 705 SMART ANK_2a 92 124 IPR002110 GO:0005515
Phac11g02775 705 SMART ANK_2a 10 40 IPR002110 GO:0005515
Phac11g02775 705 SMART ANK_2a 57 87 IPR002110 GO:0005515
Phac11g02775 705 ProSiteProfiles Zinc finger C3H1-type profile. 279 301 IPR000571 GO:0046872
Phac11g02775 705 Pfam Ankyrin repeats (3 copies) 19 124 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02775 Phac-Chr11 39023559 39027608 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02775 9 702 C2H2 Transcription Factor Family AT5G12850 53.371 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Phac11g02775 Ank_2 5.1e-10 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02775 - - gmx:100784225 1177.93