Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02771 ATGGAGTCTGAAGGCGAAGCTGGGGCAAAGCCAGTGACAGCATTGAGTGCCCAAGTGTGCCAGATATGTGGTGATGGTGTTGGGAAGAATGTGGATGGTGAACCTTTCATTGCGTGCGATGTTTGTGCTTTCCCTGTATGCAGACCTTGTTATGAGTATGAAAGGAAGGATGGGAATCAGTCTTGCCCCCAGTGCAAAACCCGGTACAAGAGGCACAAAGGAAGTCCTGCAATTCTTGGAGACACGGAAGAGGATGGTGCTGCTACTGATATTGCCAGCGACTTTAATTACGATTCAGACAATCAAAACCAAAAGCAGAAGATTTCAGAGCGCATGTTAAGCTGGCAATTGACTTATGCACGAGGCGAGGAGGTTGGTGCTCCAAATTATGATAAGGAAGTTTCTCACAACCACATTCCTCTGCTGACCAGTGGACAAGAGGTATCTGGAGAGTTGTCTGCAGCCTCTCCTGAGAGGCTCTCAATGGCATCTCCTGCAGTTGGTGGAGGAAAACGTGTCCATAATATTCCATATTCATCTGATATCAATCAATCTCCTAATATCAGGGCTGGGGATCCAGGTTTGGGTAATGTTGCATGGAAAGAAAGAGTTGATGGCTGGAAGATGAAGCAAGAAAAGAATGTTGTTCCGATGAGCACCGGGCAAGCTGCTTCTGAGAGAGGAGCTGGAGATATTGATGCTGCTACAGACGTGCTTGTGGATGATTCCTTGTTGAATGATGAAGCTCGACAGCCTCTTTCTAGGAAGGTTTCAATTTCATCATCCAGGATAAATCCATATCGTATGGTCATTATGTTGCGGCTGGTTATCCTTTGCGTTTTCTTGCATTATCGGATAACGAATCCGGTGCCCAATGCTTATCCATTGTGGTTGGTATCAGTTATATGTGAGATTTGGTTTGCCATCTCTTGGATATTGGATCAATTCCCCAAGTGGCTTCCTGTCAACCGAGAAACATATCTTGACAGGCTTGCATTGAGGTATGATCGAGAAGGAGAACAGTCACAGCTAGCTGCTGTTGACATTTTTGTGAGTACTGTTGACCCATTAAAGGAGCCCCCTCTTGTGACTGCCAATACTGTATTGTCTATTCTGGCAGTTGACTACCCAGTGGATAAGGTCTCCTGCTATGTTTCTGATGATGGTGCTGCCATGTTGACATTCGAAGCCCTTGCCGAGACATCAGAATTTGCAAGGAAATGGGTTCCCTTTTCCAAGAAGTATAGCATTGAACCCCGTGCACCCGAGTGGTACTTTGCACAAAAGATTGACTACTTGAAAGATAAGGTTCATCCATCATTTGTCAAGGATCGTAGAGCAATGAAGAGAGAATATGAGGAATTTAAAGTTCGAATCAATGGACTTGTTGCAAAGGCGCAGAAAATTCCCGAAGAAGGATGGGTGATGCAAGATGGTACACCATGGCCTGGAAATAACACCAGAGACCATCCAGGAATGATCCAGGTTTTCTTGGGCCAAAGTGGAGGACTTGACACTGAGGGTAATGAACTTCCCCGTCTAGTCTACGTGTCTCGTGAAAAGCGCCCAGGTTTCCAACATCACAAGAAAGCTGGTGCCATGAATGCACTTGTAAGAGTATCTGCTGTTCTTACCAATGGACCTTTCTTATTGAATCTTGATTGTGATCACTACATAAACAACAGCAAGGCCTTGAGGGAAGCTATGTGCTTTATGATGGATCCCAACCTTGGTAAACATGTTTGCTATGTCCAGTTTCCACAGAGGTTTGATGGTATTGATAGAAATGATCGTTATGCCAATCGTAATACAGTGTTCTTTGATATAAACTTGAGAGGCTTGGATGGCATTCAGGGTCCTGTTTATGTTGGTACTGGATGTGTCTTCAATAGGACAGCTTTATATGGTTATGAACCTCCTCTTAAACCCAAGCATAAAAAGCCTGGGTTTTTATCGTCGCTCTGTGGTGGAAATCGGAAGAGTTCAAAATCTAGTAAGAAAGGATCAGACAAGAAAAAATCTAGCAAGCATGCTGACCCAACTGTACCTATCTTCAGTCTAGAGGATATAGAAGAAGGAGTAGAAGGTACTGGATTTGATGATGAGAAATCACTTCTTATGTCACAAATGAGCCTTGAGAAAAGGTTTGGTCAGTCTGCAGTTTTTGTAGCCTCCACCCTTATGGAGAATGGTGGTGTTCCTCAGTCTGCTACTCCAGAAACTCTTCTTAAGGAGGCTATTCATGTTATCAGCTGTGGTTATGAGGATAAATCAGAATGGGGATCCGAGATAGGATGGATTTATGGTTCAGTCACAGAAGATATTCTTACTGGATTTAAGATGCATGCCCGTGGTTGGCGGTCTATATACTGCATGCCGAAGCGGCCGGCGTTCAAAGGTTCGGCTCCCATCAATCTTTCAGATCGTCTAAACCAAGTGCTTCGATGGGCTTTAGGTTCTGTGGAGATTCTTTTTAGCAGACATTGTCCCATCTGGTATGGTTATGGTGGAAGGCTAAAGTGGCTTGAAAGGTTCGCTTATGTGAACACCACAATCTATCCACTCACGGCCATTCCCCTCCTCATTTATTGTATTTTGCCTGCTGTCTGTCTGCTGACCAACAAGTTCATTATTCCACAGATCAGTAACCTTGCAAGCATATGGTTCATCTCTCTCTTTCTCTCCATCTTTGCCACCGGAATCCTGGAGATGAGGTGGAGCGGCGTAGGAATCGACGAGTGGTGGAGGAACGAACAGTTTTGGGTCATCGGCGGTGTCTCGGCCCATCTCTTTGCCGTTTTCCAGGGCCTTCTCAAAGTGCTTGCTGGAATTGACACCAACTTCACTGTCACCTCCAAGGCCTCAGACGAAGATGGAGATTTTGCCGAGCTCTACTTGTTCAAATGGACCACCCTTCTCATCCCCCCCACAACACTTCTCATAATAAACATGGTAGGAGTTGTTGCTGGCATCTCCTATGCCATCAACAGTGGCTACCAATCATGGGGACCCCTCTTTGGCAAGCTTTTCTTTGCCTTTTGGGTCATCGTCCATCTCTACCCTTTCCTCAAAGGTCTCATGGGGCGCCAGAACAGAACACCAACCATTGTGGTGGTGTGGTCCATTCTCCTTGCATCCATTTTCTCTCTGTTGTGGGTCAGAATTGATCCTTTCACCACAAGGGTCACTGGCCCTGATGTTGAAGAGTGTGGTATCAACTGCTAG 3225 0.4549 MESEGEAGAKPVTALSAQVCQICGDGVGKNVDGEPFIACDVCAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPAILGDTEEDGAATDIASDFNYDSDNQNQKQKISERMLSWQLTYARGEEVGAPNYDKEVSHNHIPLLTSGQEVSGELSAASPERLSMASPAVGGGKRVHNIPYSSDINQSPNIRAGDPGLGNVAWKERVDGWKMKQEKNVVPMSTGQAASERGAGDIDAATDVLVDDSLLNDEARQPLSRKVSISSSRINPYRMVIMLRLVILCVFLHYRITNPVPNAYPLWLVSVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDREGEQSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFSKKYSIEPRAPEWYFAQKIDYLKDKVHPSFVKDRRAMKREYEEFKVRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGFLSSLCGGNRKSSKSSKKGSDKKKSSKHADPTVPIFSLEDIEEGVEGTGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKSEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYPLTAIPLLIYCILPAVCLLTNKFIIPQISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYLFKWTTLLIPPTTLLIINMVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEECGINC* 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02771 1074 Pfam Cellulose synthase 347 1067 IPR005150 GO:0016020|GO:0016760|GO:0030244
Phac11g02771 1074 SUPERFAMILY RING/U-box 5 90 - -
Phac11g02771 1074 CDD mRING-HC-C4C4_CesA 18 68 - -
Phac11g02771 1074 MobiDBLite consensus disorder prediction 648 679 - -
Phac11g02771 1074 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 470 638 IPR029044 -
Phac11g02771 1074 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 94 IPR013083 -
Phac11g02771 1074 FunFam Cellulose synthase 3 94 - -
Phac11g02771 1074 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 250 1041 - -
Phac11g02771 1074 SUPERFAMILY Nucleotide-diphospho-sugar transferases 361 875 IPR029044 -
Phac11g02771 1074 FunFam Cellulose synthase 464 638 - -
Phac11g02771 1074 Pfam Zinc-binding RING-finger 10 86 IPR027934 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02771 Phac-Chr11 38997271 39005723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02771 1 1074 Glycosyltransferase AT5G05170 86.605 0.0 1927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02771 K10999 - gmx:100783162 2133.61