Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02768 ATGCCAGGAAAACCTGACACTGATGATTGGCGTGAGCAGATTCAGTTTCATCCTTGGTGGCGCGCAGTTGGGGAAAATGCCTCCAAATCATCTTCAGCTGATCAGTTAAATGTCTCTCCTTCACTGCCTGGAACTGATAAGACAGGTGGATGTGCTGCTAAAGAGTACCAAAACATCAAACATGACATGTCTTCAATTCCATTTACCATGGGCAAACACCTTGCTCCCAATCCCCACGCGGAATTTGTTGGTCACTCAGTTGTTTTAACATCTCCTTATTTAGATGCACAGTATGGTCAGATGTTGACTACCTACGGCCAACAAGTTATGATAAACCTTCCATTGTATGGAATGCATCAAGCTAGAATGGCTTTGCCACTTGAAATGGAAGAGGAGCCTGTTTATGTCAATGCAAAGCAGTATCATGGTATTTTGAGGCGAAGACAATCACGTGCTAAGGCTGAACTTGAAAAGAAAGTAATTAGAAACAGAAAGCCATACCTCCACGAATCCCGGCACCTACACGCCATCAGAAGGGCAAGAGGCAATGGTGGTCGCTTTCTGAACACAAAGAAGCTTGAAAATAACAGTTCTGACATCACTTCTGACAAAGGCAACAATGGTGGTGCAAACCCCTCAACAAACTCATTTCACACTCTACATGTCCTCTCCAACAATGAGAATCTAGGCTCATCAAAAACAGTTCAGGACATGCACAGAGTGCAGAGTTTCAACAATGGCTACCATAATGAAAATGGTCTTACAGCACTATACCTTCCACAAGTGAATGCAAAGAAGGAGAGAGACCCTCTTGGGGCTTTCAAATAG 828 0.4372 MPGKPDTDDWREQIQFHPWWRAVGENASKSSSADQLNVSPSLPGTDKTGGCAAKEYQNIKHDMSSIPFTMGKHLAPNPHAEFVGHSVVLTSPYLDAQYGQMLTTYGQQVMINLPLYGMHQARMALPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIRNRKPYLHESRHLHAIRRARGNGGRFLNTKKLENNSSDITSDKGNNGGANPSTNSFHTLHVLSNNENLGSSKTVQDMHRVQSFNNGYHNENGLTALYLPQVNAKKERDPLGAFK* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02768 275 MobiDBLite consensus disorder prediction 29 44 - -
Phac11g02768 275 MobiDBLite consensus disorder prediction 29 50 - -
Phac11g02768 275 PRINTS CCAAT-binding transcription factor subunit B signature 164 187 IPR001289 GO:0003700|GO:0006355
Phac11g02768 275 PRINTS CCAAT-binding transcription factor subunit B signature 133 155 IPR001289 GO:0003700|GO:0006355
Phac11g02768 275 MobiDBLite consensus disorder prediction 186 218 - -
Phac11g02768 275 MobiDBLite consensus disorder prediction 189 218 - -
Phac11g02768 275 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 29 250 IPR001289 GO:0003700|GO:0006355
Phac11g02768 275 ProSitePatterns NF-YA/HAP2 subunit signature. 135 155 IPR018362 GO:0003677|GO:0016602
Phac11g02768 275 ProSiteProfiles NF-YA/HAP2 family profile. 130 190 IPR001289 GO:0003700|GO:0006355
Phac11g02768 275 Gene3D - 130 191 - -
Phac11g02768 275 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 132 187 IPR001289 GO:0003700|GO:0006355
Phac11g02768 275 SMART cbf3 129 190 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02768 Phac-Chr11 38976183 38981870 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02768 81 232 CCAAT-HAP2 Transcription Factor Family AT5G12840 52.597 4.40e-43 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Phac11g02768 CBFB_NFYA 1.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02768 K08064 - gmx:100782085 405.601