Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02693 ATGAACATGTTAGGCCTTAGAGACTTAGTTTTCATAGCTCCAACTGCTTCTCAACTTCACCACCATCAACACCAACACCAACACCAACACCACCACCCCATTTCAGCAGAACACCATCCCAACCTTCCCCTGCCTTCTCCAGCATCTCTCAGTGTTGGCCTTGGCATTTTTCCTCTCCTAACAGTTCCACAGACCAATGATGTTCATGATCATGTTCAAGACTGTGCCAACAACAATACCACCAACCACAACACCAACTATTGGAACCTCAAGATGTGTGGTGTCTCAGAAGTGAATTCCACAAGAAAAGGTGTTGAAGATGAGGGGAGGAGTAACAAGCATGTGATGGAGAGTGAGGAAAGTGGTGAGTTTAGGGTGTGTCAGGATTGTGGCAATAGGGCCAAGAGGGACTGCAGCTATAAAAGGTGCAGGACTTGTTGCAAAGGACGTGGCTTTGATTGCAACACTCACGTGAAGAGCACATGGGTCCCAGCCTCTCTGAGACGCAGTGGTGGTAATAGTGGTAGTGATGGTAACGGTGATGGAGATGGTGATGGTGGTGCTTCTAAGAGGCTAAGAACAATAGGGTCATCCAAGAATGCTGCAGCTACTTCTCTTAGTTCCACTTCCAATGCTACCCCATCAAAGAGCTTTAGCTTAGACACCAGCTCTTGTCAACAAGATGCTGGATTCAAGCAATCTTTGCCACGGCATGTGCGTGCACCTGCTGTGTTCAGGTGCCATAGAGTGTCTGCTATTGGGAGTGGTGAAGATGAGATTGCCTACTTGGCCACAGTGCATATCAGTGGCCATGTGTTCAAGGGGTTTCTGTATGATCATGGAGCTGATGCCAGAAATGATGTGCCTAGTATCTCTGAACTGCAGCTGGGAAACAATGGAAGTGGAAAGAGTAATAATAGGGAATGTTCTTCTGCAATTGGGGTTCCAACCACTGCTTACCCTGCTTCTGTTTGCTGA 978 0.4744 MNMLGLRDLVFIAPTASQLHHHQHQHQHQHHHPISAEHHPNLPLPSPASLSVGLGIFPLLTVPQTNDVHDHVQDCANNNTTNHNTNYWNLKMCGVSEVNSTRKGVEDEGRSNKHVMESEESGEFRVCQDCGNRAKRDCSYKRCRTCCKGRGFDCNTHVKSTWVPASLRRSGGNSGSDGNGDGDGDGGASKRLRTIGSSKNAAATSLSSTSNATPSKSFSLDTSSCQQDAGFKQSLPRHVRAPAVFRCHRVSAIGSGEDEIAYLATVHISGHVFKGFLYDHGADARNDVPSISELQLGNNGSGKSNNRECSSAIGVPTTAYPASVC* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02693 325 MobiDBLite consensus disorder prediction 165 219 - -
Phac11g02693 325 Pfam Domain of unknown function (DUF702) 126 283 - -
Phac11g02693 325 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 20 311 IPR007818 GO:0003700|GO:0006355
Phac11g02693 325 MobiDBLite consensus disorder prediction 17 46 - -
Phac11g02693 325 NCBIfam LRP1 C-terminal domain 235 281 IPR006511 -
Phac11g02693 325 MobiDBLite consensus disorder prediction 193 219 - -
Phac11g02693 325 NCBIfam putative zinc finger domain, LRP1 type 126 167 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02693 Phac-Chr11 37677738 37679909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02693 1 312 C2H2 Transcription Factor Family AT5G12330 40.000 1.01e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Phac11g02693 DUF702 2.2e-52 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02693 - - gmx:100777812 476.863