Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02683 ATGGATCAGCAGCGCCGCACCGTCCGCACCCTCGTGTCGAAGCTCAGCTCCGTCTCCGAAGCCGCTCGCGTCGACGCCCTCTGCCAGCTTCGGCTCATGTCGAAGCAGGACCCGCAAACCCGACCCGTAATCGCCGAAGCTGGCGCAATCCCTTATATAGCCGAAACCCTCTACTCTTCGTCTCACACTTCCCAAGAGAACGCAGCGGCCACACTGCTCAACCTCTCCATCACGGAGAAGGAGCCTCTCATGATGACGCGTGGCGTCCTCGACGCGATCGCGCACGTGATCTCGCACCACGGCACCACCTCATCGCCAGCCGCCGTCCAGTCCGCCGCCGCCGCCATACACAGCCTCCTCTCCTCCGTCGACGCCTACCGTCCCGTCGTCGGCGCCAAGCGCGAGATCGTGTACTCGCTTGTCGATATACTCCGTTGCCACGTGTCCTCGCCCCCGCGCACGATCAAGGACGCGCTCAAGGCGCTCTTCGCCATCGCGCTCCACCCGCTCAACCGCGCCACGATGATTGGCCTCGGCGTTGTTCCCGCGCTTTTTTCGCTTGTTGTGAAGGACGGCAGGGTCGGCATCGTGGAGGACGCGACGGCGGTGGTTGCGCAGGTTGCGGGATGTGAGGAAGCCGTCGAGGCCTTCTGTAAAGGCTCTGGCGGCCTCGGCGTGCTCGTCGACCTCCTTGACCTCGCCACCGCCTCCAGCATGCGCTCCAAGGAGAATGCCGTCTCGGCGCTCCTCAATCTGGTGCGCTGCGGCGGGGAGAAGGTCGCCGCAGATGTGCGCGACGCGGTGGCGTTCGGAGCGCTGGACGGAATTAGGGACGTAAGGGACTGCGGCAGCGGCAAGGGGAGGACGAAGGCGGCGGAATTGTTGAAGGTCTTGCTTGGTGAGAGCAATGGCAATGGCAATGGCAATGTGGTGTTGAGTAGTGATAACTGTTCTTCGTTTGGTTCCTCGAGGAATCATGATTCGGAATGA 990 0.6293 MDQQRRTVRTLVSKLSSVSEAARVDALCQLRLMSKQDPQTRPVIAEAGAIPYIAETLYSSSHTSQENAAATLLNLSITEKEPLMMTRGVLDAIAHVISHHGTTSSPAAVQSAAAAIHSLLSSVDAYRPVVGAKREIVYSLVDILRCHVSSPPRTIKDALKALFAIALHPLNRATMIGLGVVPALFSLVVKDGRVGIVEDATAVVAQVAGCEEAVEAFCKGSGGLGVLVDLLDLATASSMRSKENAVSALLNLVRCGGEKVAADVRDAVAFGALDGIRDVRDCGSGKGRTKAAELLKVLLGESNGNGNGNVVLSSDNCSSFGSSRNHDSE* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02683 329 PANTHER U BOX DOMAIN-CONTAINING 7 298 - -
Phac11g02683 329 FunFam ARM repeat superfamily protein 2 304 - -
Phac11g02683 329 SUPERFAMILY ARM repeat 7 299 IPR016024 -
Phac11g02683 329 SMART arm_5 210 254 IPR000225 GO:0005515
Phac11g02683 329 SMART arm_5 37 77 IPR000225 GO:0005515
Phac11g02683 329 SMART arm_5 168 209 IPR000225 GO:0005515
Phac11g02683 329 Pfam Armadillo/beta-catenin-like repeat 38 76 IPR000225 GO:0005515
Phac11g02683 329 Gene3D - 2 284 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02683 Phac-Chr11 37606754 37608769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02683 8 298 U-box Gene Family AT1G23030 32.877 1.01e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02683 - - gmx:100787115 491.886