Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02643 ATGGGGAGTAGAACTACTAGGGGTTTTGGTGTTGAAGATGACAAGGGAGCTGAAAGAGGAATGCCGAGCTTCAATTCTGAGTTACCCATTTCCAATTCTAGCTATGCAGAGGGGAGCACAATTGATTCTTTTCGTGTTTCTGACTTTGGTGCATTTGATCAGCCATATCGCGTAGAGGATGCTGTCTGCGTTAGTGGAAACCCAATTTACAACTCACTAAAAGTAAGTAGCCAAACAATTTCTCCGGGTTCTGTTCACATTAGTAGCCTTGGTCAGTTGCCAACTTCACTTGATAAAAGTCCATTGACAAATCAAACAGAGCTGCAGAGGTTGCGATTACAGAAGGTTCAATCATCAAATCCTGACACTATTTTAATTGGTAATACAGATAATCAGGAGGAGTCTGCCATGGCTGATGCCAGTCCCAGGACTGATATTTCTACAGATGTCGACACTGATGACAAAAATCAGCCGTTTGATAGAAATCAATCCCTTGCTGCTGTTTCTGACTCTAGTGACAGGTCGAAAGATAAATCGGATCAAAAGACTCTCCGCAGGCTTGCCCAGAACCGTGAAGCTGCAAGAAAAAGCCGTTTGAGAAAGAAAGCCTATGTCCAACAGTTAGAAAGTAGTCGTTTGAAGCTGACCCAACTAGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGGATCTTCATATCAAGCTCGGGTGATCAAGCACATACATTGAGTGGAAATGGGGCAATGCAATTTGATGCAGAATATGCAAGGTGGCTGGAAGAGCAGAATCGACAAATAAATGAGCTAAGAGCAGCTGTAAATTCTCATGCAAGTGACACCGAACTGCGCATGATTGTTGATGGTATATTGGCACATTATGATGAGATTTTTAGGATGAAAGGTGTTGCTGCAAAGGCTGATGTTTTCCATTTGTTGTCTGGTATGTGGAAAACGCCTGCTGAGAGGTGTTTTTTGTGGCTTGGTGGTTTTCGGTCATCTGAACTCCTCAAGCTGCTGGCAAATCAATTGGAACCTCTTACAGAGCAGCAGCTGATGGGTATCACCAACTTGCAGCAGTCTTCCCAACAAGCAGAAGATGCATTGTCTCAGGGCATGGAAGCATTGCAACAGTCCCTTGCGGAAACACTGTCCACCGGAGCACCTGCCTCATCTGGTTCATCAGGGAATGTGGCAAATTACATGGGTCAAATGGCTATGGCCATGGGTAAGCTAGGGACACTTGAAGGGTTCATTCGACAGGCTGACAATCTTCGCCAGCAGACTCTACAACAAATGCACCGGATTCTGACAACTCGCCAATCGGCTCGCGCCCTCCTCGCAATTCATGACTATTTTTCGCGACTGCGTGCTCTGAGTTCACTCTGGCTGGCTCGCCCAAGAGATTGA 1404 0.4594 MGSRTTRGFGVEDDKGAERGMPSFNSELPISNSSYAEGSTIDSFRVSDFGAFDQPYRVEDAVCVSGNPIYNSLKVSSQTISPGSVHISSLGQLPTSLDKSPLTNQTELQRLRLQKVQSSNPDTILIGNTDNQEESAMADASPRTDISTDVDTDDKNQPFDRNQSLAAVSDSSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHTLSGNGAMQFDAEYARWLEEQNRQINELRAAVNSHASDTELRMIVDGILAHYDEIFRMKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLANQLEPLTEQQLMGITNLQQSSQQAEDALSQGMEALQQSLAETLSTGAPASSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02643 467 Coils Coil 258 278 - -
Phac11g02643 467 Coils Coil 201 228 - -
Phac11g02643 467 Pfam Seed dormancy control 264 339 IPR025422 GO:0006351|GO:0043565
Phac11g02643 467 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 180 224 IPR004827 GO:0003700|GO:0006355
Phac11g02643 467 Pfam Basic region leucine zipper 178 224 IPR004827 GO:0003700|GO:0006355
Phac11g02643 467 SMART brlzneu 178 241 IPR004827 GO:0003700|GO:0006355
Phac11g02643 467 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 185 200 IPR004827 GO:0003700|GO:0006355
Phac11g02643 467 CDD bZIP_HBP1b-like 182 234 - -
Phac11g02643 467 MobiDBLite consensus disorder prediction 119 184 - -
Phac11g02643 467 MobiDBLite consensus disorder prediction 1 33 - -
Phac11g02643 467 MobiDBLite consensus disorder prediction 119 142 - -
Phac11g02643 467 SUPERFAMILY Leucine zipper domain 182 225 IPR046347 GO:0003700|GO:0006355
Phac11g02643 467 FunFam BZIP family transcription factor 181 230 - -
Phac11g02643 467 Gene3D - 181 232 - -
Phac11g02643 467 PANTHER TRANSCRIPTION FACTOR TGA9 119 466 - -
Phac11g02643 467 ProSiteProfiles DOG1 domain profile. 247 464 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02643 Phac-Chr11 37152848 37161301 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02643 137 467 bZIP Transcription Factor Family AT3G12250 80.363 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac11g02643 DOG1 5.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02643 K14431 - gmx:100101881 816.224