Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02629 ATGTTGATAAAATATCTTATTATTGCGACTTCATTAACCCTGCATTGCACTGAGTCATTGGCAAAAGCTAGTGAATCTATTCATCTTTATCCTACCATGGCATTAGAACTTGTTGGTGGTGCTCTTCTTTCTGCTTTCCTTGGGATTGCATTCCAGAAGCTAGCTTCTCCTCAAATTCTCAATTTCTTTCATGCAAGAGAGCTTGATCAGAAGCTGCTCAACAAGTTGGAAACCAAGATGCACTCCATCAATTCTCTGGCTGATGATGCAGAGCGAAAGCAGTTCACAGATCCACATGTCAGAAACTGGCTGCTTAAGGTTAAAGATATTGTCCTTGATGCAGAGGATCTCTTAGATGATATACAAAAGCTCTACACAAGCCAAGTTGATACTGAATCTGAATCTCAAACCTGTTCAGGTTGTACTTGCAAGGTACTCAATTTCTTCAAAACTTCTCCTAATAGTTCCCTTAACAAGGAAATTGAGTGTAGGATGGAACAAATCCTTGACGGCTTAGAATTTCTTTCAAGCCAAAAGGGTGATCTAGGATTAAAAACAGCTAGTGATGTTGGATATGGGTTGAGTAATGAACTGCCACAGAAATCACACACAACATCACTGGTTGATGGAATTGATATCTATGGCAGAGATGATGATAAATTAGTGATCTTTGACTGGCTGACCTCTGACATCAACAATGGTAACCAGCCATCAATACTTTCTATTGTAGGAATGGGTGGAGTGGGTAAGACCACTCTTGCTCAACATGTATTCAATGACCCAAAGGTGGATGAGGCTAAATTTGTTGTCAAGGCTTGGGTTTGTGTTTCAGATGAATTTGATGTTTTCAAGATATCAAGAGCAATTCTTGAGGCACTTACGAAATCAACTGATGATAGTAGAGATATGGAGATGGTTCATAGAAGATTGAAGGAAGAATTGAAGGGAAAGAAGTTTCTTCTTGTTTTGGATGACGTTTGGAACGAAAACCAACCTAAATGGGAGGAACTGCGGAAGCCTCTTGTTTTTGGGGCGCAAGGGAGTAGGATTCTTGTTACCACACGTAGTAAGGAAGTTGCTTCCATCATGCGGTCAAAACATCACTCCCTAAAGCAATTACAGGAAGATGATTGTTGGAAGTTGTTTGCTAAACATGCATTCCAAGATGACGATACTGAACCAGATCCAGAGTGCAGGAAGATTGGCATGGAGATTGTTAAAAAATGTAAAGGACTACCCCTCGCGTTGAAAACAATGGGAAGTATGTTATACAACAAATCATCTGTTTCAGAATGGAAAACTGTGTTCCAAAGCGAAATATGGGAATTTTCAAAAGAGCGTTGTGATATTATTCCCGCTTTAGCATTGAGCTATATCCACCTTCCTTCCCATCTTAAGGTATGCTTTTCTTACTGTGCCCTATTGCCCAAGGATTATGAGTTTAGAAAGAAGCGTTTAATTCAGTTGTGGATGACTGAAAATTTCCCCCACTTTCGTCAAGATAGTAGGACTCCAGAAGAAGTTTGCCAACAATTCTTCAATGATCTACTATCCAGGTTCTTCTTTCAACCATCAGTTGAAAACAAAAAATTATATGTCATGCATGACCTTCTAAATGATTTGGCAAAATATGTCGGTGGAGACATGTACATCAGGTGCAAAGTTGATGAACCAGAAAAAACACAAAAGGTAACTCGACATTTGTTAGTTGAATTTGGTCACAATGAATTTTTTGATGGGTTTGGAAATTTATGTAATACAAAAAGCTTACGTACATTTATTCCAAAAGCTAGGAGCACAATGAATGCATGGGAAATGAAAATGTCAATACATGAATTGTTATCCAAGTTTAAATTCTTACGTATCTTATCTCTGTCTTATTGTTCTGACCTTCGAGAGTTACCTAACTCTGTTGGAAATCTTGAGCATCTTCGTTCCTTAGACCTCTCCTGTACTGCAATAAACAGAGTAACTGAAAAAATATGTTTACTCTCCCACTTGCAAATACTGAAGTTGAACTACTGTAGAGATTTGTGGGAGTTGCCCTCAAATTTGCATTTACTCACCAATTTGTGTCGCCTTGAATTTAAAAAGACTAATGTGAGTAAGATGCCACCGCATTTGGGAAAACTGAAGAATCTTAAAGTAGTAATGAATTCTTTTAATGTTGGCCATAGCAGGGAGTTGGGTATTCAACAGCTAGGAGAGCTCAACCTTGAGGGAAGTCTATCAATTAAGGAGCTACAGAATGTTGAGAATTCGCTAGATGCATTAGAAGCAGATTTGAAGAATAAAACACACCTTGTGACGTTGAAGTTGCGATGGGATGAGGATGAGGACTCTATTGATTCAAAGAAAGAAGAGGACGTAATTGAGAATCTACAACCTTCCAAAAACTTAAAGAAGTTGTCAATCTTTGGCTATGGTGGGAAACAATTTCCAAAATGGTTACTAGAAAATTCATTGTGGAATATGACGTCCTTAGTATTGGATAAATGTGAATCTTGCCAATGTTTACCTCCCCTTGGACTTTTGCCGTTTCTCAAGGTATTGAAGATTATAAATCTTAATGGGATAGTGAATATTGATGCTGATTTTCATGGGAACAACTCTTCTTCATTTACATCCCTTAAAACATTGGAGTTCTTCTCTCTGAGTCGATGGGAAAAGTGGGACTGTCAAGCTGTGACAGATACTTTTCCACGTTTACAACATCTTTCCATAATAAATTGTCCGAAACTGAAAGGACAGCTTCCAGAGAAACTTATTCCTTTGGAAACACTACAAATTCAAGGTTGCCAACAACTTGAGGCTTCCTCTCCTAGGGCTCTAGATTTAGAACTAAGTGACTGTGGAAAGCTGCAGTTAGAGTCATGGGGTACAATGAAAAGCCTCACAATGACAAGATCATTGCTGGAAACTGTTGGGTCGTCTGACACTCTTGAAAACTTGGAGATTGATTCACCCCTAGAGCCAACCAACCATGATTGTGTCTCTCTACGAAGCTTTGCACTGGATTTGTTCCCAACACTCAGGACGCTTGGTCTCCGTGGGTTTGGTAATCTAGAGATGATTTCACAGAGTCTCGTCCATAATCATCTAGAAGAGCTAACACTCAGTTATTGTCTTAAATTTGAATCATTGCCTGGAAGCATGCATATGCTGCTTCCATCTCTGAGGAGCTTATGCATACAAGGCTGTTCAAGACTTGAGTCATTCCCTGACGGAGGTTTCCCATCAAATCTCAAGGTTCTGAGAATCATTAATTGCTCTGGACTTGTTGGCTCACTGAAAGGAGCTTTCACAAACAGTTCTTCTTTGGAAACCTTGTGGATTACAGAACCGGATGCAGAATGTTTTCCTGATGAAGGTTTGCTTCCACTCTCTCTTACTTCTCTAATCATCTCTAATTGTCCAAATCTAGAAAAACTGGACTACAAGGGTCTCCATCAACTCTCATCCCTTCAGAATTTGTATCTTATAAATTGCATCAACCTCCAATGCTTACCAGAGGAGGGTCTTCCCAGATCAATTTCAAAACTTAGAATTCGTGATTGTCCTTTGCTGGAACCGCGTTGCCAGAAAGAAGGAGACGAAGACTGGGAAAAGATTGTGCACATTCAAGAACGGAACATATCGTAA 3642 0.3932 MLIKYLIIATSLTLHCTESLAKASESIHLYPTMALELVGGALLSAFLGIAFQKLASPQILNFFHARELDQKLLNKLETKMHSINSLADDAERKQFTDPHVRNWLLKVKDIVLDAEDLLDDIQKLYTSQVDTESESQTCSGCTCKVLNFFKTSPNSSLNKEIECRMEQILDGLEFLSSQKGDLGLKTASDVGYGLSNELPQKSHTTSLVDGIDIYGRDDDKLVIFDWLTSDINNGNQPSILSIVGMGGVGKTTLAQHVFNDPKVDEAKFVVKAWVCVSDEFDVFKISRAILEALTKSTDDSRDMEMVHRRLKEELKGKKFLLVLDDVWNENQPKWEELRKPLVFGAQGSRILVTTRSKEVASIMRSKHHSLKQLQEDDCWKLFAKHAFQDDDTEPDPECRKIGMEIVKKCKGLPLALKTMGSMLYNKSSVSEWKTVFQSEIWEFSKERCDIIPALALSYIHLPSHLKVCFSYCALLPKDYEFRKKRLIQLWMTENFPHFRQDSRTPEEVCQQFFNDLLSRFFFQPSVENKKLYVMHDLLNDLAKYVGGDMYIRCKVDEPEKTQKVTRHLLVEFGHNEFFDGFGNLCNTKSLRTFIPKARSTMNAWEMKMSIHELLSKFKFLRILSLSYCSDLRELPNSVGNLEHLRSLDLSCTAINRVTEKICLLSHLQILKLNYCRDLWELPSNLHLLTNLCRLEFKKTNVSKMPPHLGKLKNLKVVMNSFNVGHSRELGIQQLGELNLEGSLSIKELQNVENSLDALEADLKNKTHLVTLKLRWDEDEDSIDSKKEEDVIENLQPSKNLKKLSIFGYGGKQFPKWLLENSLWNMTSLVLDKCESCQCLPPLGLLPFLKVLKIINLNGIVNIDADFHGNNSSSFTSLKTLEFFSLSRWEKWDCQAVTDTFPRLQHLSIINCPKLKGQLPEKLIPLETLQIQGCQQLEASSPRALDLELSDCGKLQLESWGTMKSLTMTRSLLETVGSSDTLENLEIDSPLEPTNHDCVSLRSFALDLFPTLRTLGLRGFGNLEMISQSLVHNHLEELTLSYCLKFESLPGSMHMLLPSLRSLCIQGCSRLESFPDGGFPSNLKVLRIINCSGLVGSLKGAFTNSSSLETLWITEPDAECFPDEGLLPLSLTSLIISNCPNLEKLDYKGLHQLSSLQNLYLINCINLQCLPEEGLPRSISKLRIRDCPLLEPRCQKEGDEDWEKIVHIQERNIS* 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02629 1213 Coils Coil 73 93 - -
Phac11g02629 1213 PANTHER DISEASE RESISTANCE PROTEIN RP 73 933 IPR044974 GO:0006952
Phac11g02629 1213 SUPERFAMILY L domain-like 999 1189 - -
Phac11g02629 1213 Gene3D - 196 371 IPR027417 -
Phac11g02629 1213 Pfam NB-ARC domain 232 437 IPR002182 GO:0043531
Phac11g02629 1213 Gene3D Ribonuclease Inhibitor 587 967 IPR032675 -
Phac11g02629 1213 SUPERFAMILY L domain-like 533 937 - -
Phac11g02629 1213 Gene3D - 52 156 - -
Phac11g02629 1213 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 472 IPR027417 -
Phac11g02629 1213 Coils Coil 745 768 - -
Phac11g02629 1213 Gene3D - 372 456 IPR042197 -
Phac11g02629 1213 FunFam Probable disease resistance protein At1g61300 203 368 - -
Phac11g02629 1213 Gene3D Ribonuclease Inhibitor 990 1203 IPR032675 -
Phac11g02629 1213 PRINTS Disease resistance protein signature 239 254 - -
Phac11g02629 1213 PRINTS Disease resistance protein signature 615 631 - -
Phac11g02629 1213 PRINTS Disease resistance protein signature 409 423 - -
Phac11g02629 1213 PRINTS Disease resistance protein signature 313 327 - -
Phac11g02629 1213 Gene3D - 457 544 IPR036388 -
Phac11g02629 1213 FunFam Probable disease resistance protein At5g66910 372 457 - -
Phac11g02629 1213 Pfam Rx N-terminal domain 45 123 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02629 Phac-Chr11 37066167 37069969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02629 240 436 WRKY Transcription Factor Family AT5G45050 27.751 4.08e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02629 - - pvu:PHAVU_011G201100g 1598.95