Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02626 ATGGACTTTATTCTTTTTCTAATGAGTTGCATAGTTCATATACTGTTTTTCCCTTCTGAAACAGTCTTCGCAGCAGCGGAGACTTCATCCCTTGCACAATCACAGTCCCTCAGTTACAGACAGACCTTAGTTTCCCCACGTGGAATATTTGAACTCGGTTTCTTCAACCTTGGGAATCCCAACAAAATCTACCTCGGAATCTGGTACAAGAATATCTCTCTACAAAACATAGTATGGGTTGCAAACAGTGCCATCCCAACCAAGGACTCTTCTGCCATCTTGAAACTAAACAGTTCTGGCAATTTGGTCCTCACACAAAACAACTCGGTTGTTTGGTGTACAAGTTCTGAAGAAAAGGCACATAATCCAGTGGTAGAACTCTTGGACTCTGGAAATCTTGTGATAAGAGATGAGAATGAAGCAAAGGCAGAGGCATATCTGTGGCAAAGCTTTGATCATCCATCTAATACAGTGCTGCCAGGAATGAAGCTTGGATGGGACCTCAAAAAAAATCTTAGTGTTTTCCTGACAGCTTGGAAAAGTGATGATGATCCGAAACCTGGAGACTTATCTTGGGGCATTGTTCTGCATCCTTATCCTGAGATGTATATGATGAAGGGACCAAAAAAGTACTGGAGACTTGGGCCATGGAATGGTTTGCGTTTCAGTGGAACGCCACTTAGCACCATTCACCGTTTTGAGTTTGTCTCCAACCAGGAAGAGGTTTATATCAGATGTAGCCCCGAACAAACTAGTTTAGTAATAAAATTGGTACTGAACCAAACTGCACAAGGGCGTCAACTTTATGTATGGTCAGAGAAATCGTGGATTTGGTTGACAACAATGCCAGATGACCACTGTGATAGTTATGGAGTTTGTGGAGCAAATACTTATTGCACCACTTCTGCATCAGCAATGTGTGATTGCTTAAAAGGGTTCAAGCCTAAGTCTCCTGAGAAATGGAACTTAATGGAATGGTCCCAAGGATGTGTCCCCGAACATCCAATTAGCTGCAAAGACAAGTTGAGTGATGGTTTTTTCTTCATGGATTGCTTGAAAGTTCCGGATACTGAATATACGTTTGTGGATGAGACTATTGATTTAAAACAATGCAGAACCAAGTGCTTGAATAATTGTTCATGCATGGCATATACCAATTCAAATATAAGTGGAGCAGGCAGTGGCTGTGTCATGTGGTTTGGTGATTTATTTGACATCAAACTTTATTCACATCAAGAAATGGGGCAGCGCCTATACATAAGGTTCAATCCTTCAAAATTAGAGTCTATCAGGCACAAGAAGAACTCTACAATTGTATTTGTAATCTCCATTGCTGCAACTATTGGAGTGATGCTCTCTGTTTATTTTGTCCACAGAAGGAACACTACAGATAAGTCAAAGACAAAAGAGAACATTGAAAGGCAGCTACATGTTCTGGATGTGACTTTGTTTGATCTTTTATCAATCACAACCGCCACTAACAATTTCTCATTGAATAATAAGATTGGACAAGGTGGTTTTGGACCTGTATATAAGGGAAAATTAGTGGATGATCGAGAAATTGCTGTCAAGAGACTTTCAAGTAGCTCAGGACAAGGAATAACTGAGTTCATGACAGAAGTGAATGTGATTGCAAAGCTTCAACACCGAAATCTTGTAAAGCTCCTTGGTTGTTGCTTTCAAGGACAAGAAAAGTTACTAGTATATGAATACATGGTTAATGGCAGCCTAGACACCTTTCTTTTTGATAAAATAAAAGCTAAATTGCTGGAATGGCCCCAACGTCTGCACATAATATTTGGGATTGCCAGGGGCCTTTTGTATCTACATCAAGATTCCCAGTTGAGGATTATTCATAGAGATCTCAAAGCAAGTAATATTTTACTTGACCAAAAGTTAAATCCAAAAATATCAGATTTTGGAATGGCCAAGGCTTTTGGAGGAGACCAAATAGAAGGAAACACAAATAAAGTTGTTGGGACTTAG 1986 0.3978 MDFILFLMSCIVHILFFPSETVFAAAETSSLAQSQSLSYRQTLVSPRGIFELGFFNLGNPNKIYLGIWYKNISLQNIVWVANSAIPTKDSSAILKLNSSGNLVLTQNNSVVWCTSSEEKAHNPVVELLDSGNLVIRDENEAKAEAYLWQSFDHPSNTVLPGMKLGWDLKKNLSVFLTAWKSDDDPKPGDLSWGIVLHPYPEMYMMKGPKKYWRLGPWNGLRFSGTPLSTIHRFEFVSNQEEVYIRCSPEQTSLVIKLVLNQTAQGRQLYVWSEKSWIWLTTMPDDHCDSYGVCGANTYCTTSASAMCDCLKGFKPKSPEKWNLMEWSQGCVPEHPISCKDKLSDGFFFMDCLKVPDTEYTFVDETIDLKQCRTKCLNNCSCMAYTNSNISGAGSGCVMWFGDLFDIKLYSHQEMGQRLYIRFNPSKLESIRHKKNSTIVFVISIAATIGVMLSVYFVHRRNTTDKSKTKENIERQLHVLDVTLFDLLSITTATNNFSLNNKIGQGGFGPVYKGKLVDDREIAVKRLSSSSGQGITEFMTEVNVIAKLQHRNLVKLLGCCFQGQEKLLVYEYMVNGSLDTFLFDKIKAKLLEWPQRLHIIFGIARGLLYLHQDSQLRIIHRDLKASNILLDQKLNPKISDFGMAKAFGGDQIEGNTNKVVGT* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02626 661 SMART blect_4 34 154 IPR001480 -
Phac11g02626 661 ProSiteProfiles PAN/Apple domain profile. 338 423 IPR003609 -
Phac11g02626 661 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 651 - -
Phac11g02626 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Phac11g02626 661 Pfam PAN-like domain 340 406 IPR003609 -
Phac11g02626 661 Pfam Protein tyrosine and serine/threonine kinase 497 646 IPR001245 GO:0004672|GO:0006468
Phac11g02626 661 SUPERFAMILY Protein kinase-like (PK-like) 472 661 IPR011009 -
Phac11g02626 661 SMART serkin_6 496 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02626 661 Gene3D - 22 152 IPR036426 -
Phac11g02626 661 Pfam D-mannose binding lectin 77 180 IPR001480 -
Phac11g02626 661 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 572 661 - -
Phac11g02626 661 Gene3D Phosphorylase Kinase; domain 1 456 571 - -
Phac11g02626 661 SMART ntp_6 341 422 IPR003609 -
Phac11g02626 661 ProSiteProfiles Protein kinase domain profile. 496 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02626 661 CDD B_lectin 41 154 IPR001480 -
Phac11g02626 661 ProSiteProfiles Bulb-type lectin domain profile. 28 148 IPR001480 -
Phac11g02626 661 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 459 571 - -
Phac11g02626 661 Gene3D Transferase(Phosphotransferase) domain 1 572 661 - -
Phac11g02626 661 Pfam S-locus glycoprotein domain 212 317 IPR000858 GO:0048544
Phac11g02626 661 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 151 - -
Phac11g02626 661 CDD PAN_AP_plant 334 421 - -
Phac11g02626 661 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 185 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02626 Phac-Chr11 37047676 37052505 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02626 423 661 Receptor kinase-like Gene Family AT4G23190 49.791 8.59e-73 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac11g02626 PK_Tyr_Ser-Thr 3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02626 - - gmx:100808227 1051.97