Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02612 ATGACAGTAGAACTTGTTGGTGGTGCTCTTCTCTCTGCTTTCCTTGGGCTTGCATTCCAGAAGCTAGCTTCTCCTCAAATTCTCGATTTCTTTCATGCAAGAAAGCTTGATCAAAATCTGCTCAACAAGTTGGAACTCAAGCTGCACTCCATCCATTCTCTGGCTGATGATGCAGAGCGAAAGCAGTTCATGAATCCTCATGTCAGAAACTGGCTGCTTAAGGTCAAAGATGTTGTCCTTGATGCAGAGGATCTCTTGGATGATATACAAAAGCTCTCCAAAAGACAAGATGCTGAATCTGAATCTCAAACCTGTTCAGGCTATACTTGCAAGGTACTCAATTTCTTCAAATCTTCTCCTATTACTATTAGTTCCCTTAACAAGGAAATTGAATGTAAGATGGAACAAATCCTTGACGACTTAGAATTTCTCTCAAGCCAAAGGGGTGATCTAGGATTGAAAACAGCTGGCGGTGTTGGATCTGGGTTGAGTAATGAACTGCCACAGAAATCACAAACAACATCGTTGGTCGTTGGAACTGATATCTATGGCAGAGATGATGATAAAAGATTGATCATTGACTGGCTGACTTCTGACATCAACAATGGTAACCAACCATCAATACTTTCTGTTGTGGGAATGGGTGGAGTAGGTAAGACTACTCTTGCTCAACATGTATTCAATGACCGAAAGGTGGATGATGCTAAATTTGTTGTCAAAGCCTGGGTTTGTGTTTCAGATGAGTTTGATGTTTTCAAGATATCAAGAGCAATTCTTGAGTTTGTTACTAAATCAACTGACGATAGTAGAGATATGGAGATGGTTCACACAAGATTGAAGAATGAATTGACGGGAAAGAAATTTCTTCTTGTTTTGGATGACGTTTGGAATGAAAACCAACCTAAATGGGAGGAAGTGCGGAAGCCCCTTGTTTTAGGGGCCCAAGGGTGTAAGATTCTTGTCACCACACGTAGTAAGGAAGTTGCTTCTACCATGTGGTCAGAAGAATACACCCTACAAAAATTACAAGAGGATAATTGCTGGAAGTTGTTTGCTAAACATGCATTCCGAGATGATGATACTCAAATAAATCCAGAGTGTAGGGAGATTGGCATGAAGATTGTTAAAAAATGTAAAGGACTACCACTGGCCTTGAAAACAATGGGAAGTATGTTATACAACAAATCATCTGTTTCAGAATGGCAAACTGTGTTCCAAAGCGAAATATGGGAATTTTCAAAAGAGCGTTGTGATATTATTCCCGCTTTAGCATTGAGCTATATCCCCCTTCCTTCACATCTGAAGGTATGCTTTGCTTACTGTGTCCTATTCCCCAAGGATTATGAACTTAAAAAGGATGATTTGATTTATTTGTGGATGACTGAAAATTTCGCCCACTGTCGTCAACATAGTAGGACTCCAGAAGAAGTTTGCCAACAATACTTCAATGATCTACTATCAAGGTCCTTCTTTCAACCAATAGGTGAATATGATGAAAAAGTATATGGAGAAGTATATGGAGAAGTATATAAAGAAGTATTTATCATGCATGACCGTTTACATGATTTGACAAAATATGTCGGTGGAGGACTATACTTTGGGTGCGATGTTGATCAAACAGAAAAGATACCGAAAGTAACTCGTCATTTATCAATTGAACTTGGTCGATTTGAATATTTTGATGAGTTTGGAACTTTATGTAATACAAGAAGGTTACGGGGTTTGAGTATCAAAATTTCGATACATGAATTGTTGTTCAAGTTTAAGTTCTTACGTAACTTATCTCTGTCTTGTTGTTCTGACATTCGAGAGTTACTTGACTCTATTGGCAATCTTGAGTATCTCTGTTCCTTAAACCTCTCCTATACTGAAATAGAAAGACTAAATGAAAATATATGTTTACTCTTCCACTTGCAAATACTGATGTTGAACTATTGTTTATATTTGATGGAACTACCCTCAAATTTGCATTTAGTCACTAATCTGTGTCGTCTTGAATTTATAAGGACGAAAGTGGGAATATATGCTGTTACGAAATATATATCAAGAGCAATTCTTGAGGCTGTTACTAAATCAACTGATGATAGTAGAAATTTGGAGATGGTTCACAGGAGATTGAAAGAAGAATTGACGGGGAAGAAATTTCTTCTTGTTTTGGATGATGTTTGA 2169 0.3771 MTVELVGGALLSAFLGLAFQKLASPQILDFFHARKLDQNLLNKLELKLHSIHSLADDAERKQFMNPHVRNWLLKVKDVVLDAEDLLDDIQKLSKRQDAESESQTCSGYTCKVLNFFKSSPITISSLNKEIECKMEQILDDLEFLSSQRGDLGLKTAGGVGSGLSNELPQKSQTTSLVVGTDIYGRDDDKRLIIDWLTSDINNGNQPSILSVVGMGGVGKTTLAQHVFNDRKVDDAKFVVKAWVCVSDEFDVFKISRAILEFVTKSTDDSRDMEMVHTRLKNELTGKKFLLVLDDVWNENQPKWEEVRKPLVLGAQGCKILVTTRSKEVASTMWSEEYTLQKLQEDNCWKLFAKHAFRDDDTQINPECREIGMKIVKKCKGLPLALKTMGSMLYNKSSVSEWQTVFQSEIWEFSKERCDIIPALALSYIPLPSHLKVCFAYCVLFPKDYELKKDDLIYLWMTENFAHCRQHSRTPEEVCQQYFNDLLSRSFFQPIGEYDEKVYGEVYGEVYKEVFIMHDRLHDLTKYVGGGLYFGCDVDQTEKIPKVTRHLSIELGRFEYFDEFGTLCNTRRLRGLSIKISIHELLFKFKFLRNLSLSCCSDIRELLDSIGNLEYLCSLNLSYTEIERLNENICLLFHLQILMLNYCLYLMELPSNLHLVTNLCRLEFIRTKVGIYAVTKYISRAILEAVTKSTDDSRNLEMVHRRLKEELTGKKFLLVLDDV* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02612 722 Gene3D - 27 122 - -
Phac11g02612 722 FunFam Probable disease resistance protein At5g66910 341 426 - -
Phac11g02612 722 FunFam Probable disease resistance protein At1g61300 165 337 - -
Phac11g02612 722 Gene3D - 166 339 IPR027417 -
Phac11g02612 722 Coils Coil 41 61 - -
Phac11g02612 722 Gene3D - 426 526 IPR036388 -
Phac11g02612 722 SUPERFAMILY L domain-like 516 668 - -
Phac11g02612 722 Coils Coil 127 147 - -
Phac11g02612 722 Gene3D - 341 425 IPR042197 -
Phac11g02612 722 PANTHER DISEASE RESISTANCE PROTEIN RP 43 666 IPR044974 GO:0006952
Phac11g02612 722 Pfam Rx N-terminal domain 11 103 IPR041118 -
Phac11g02612 722 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 441 IPR027417 -
Phac11g02612 722 PRINTS Disease resistance protein signature 586 602 - -
Phac11g02612 722 PRINTS Disease resistance protein signature 282 296 - -
Phac11g02612 722 PRINTS Disease resistance protein signature 208 223 - -
Phac11g02612 722 PRINTS Disease resistance protein signature 378 392 - -
Phac11g02612 722 Pfam NB-ARC domain 187 406 IPR002182 GO:0043531
Phac11g02612 722 Gene3D Ribonuclease Inhibitor 536 682 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02612 Phac-Chr11 36887089 36890449 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02612 209 405 WRKY Transcription Factor Family AT5G45050 29.808 7.05e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02612 - - pvu:PHAVU_011G201100g 1005.74