Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02596 ATGGTGGTCTTATCTTCTTTCTGGGGCTCTGCACAATCACTGCTTGCCCTTGTGGCTATCATTATTGAGCTATTCCAGCAAACTCACGGTGCCCAGGATCGTCCATTCTGTGCTCCTTCTTCCTGTGGCAAAATTGGCAACATAAGTTATCCTTTCCGACTCAAAGGCGACCCACCTGGTTGCGGCCTCCCAAGGTACGAATTAGATTGTGTAAAGAATGTGACAGTGTTCAGTTTGTTTTCAGGGAAATACCATGTTCAGAATATCAACTACCAAACATACAGCATCCAATTGAGTGATGCAGGTCTTGAGGAGGACACTGCTTGCTTCATTCCTCGCTATTTCATCTCTAGATGGAACTTTACTTACATTGGTGGTCCTCAAAATTATGCCACCGATCCACTAACTTTCTGGAATGGGAATGAGACTCCTGATTGGCCTCCTTATGTAGCGTTTCTAAACTGCAGTGATCCAGTGACTGATGATCCTCGATACGTGGAAGTGAATGGCAGACTTTGTGATTCTGGAGGCCATGTCTATGCTGTTCTTTCTTCTTCTGCTAAATTCACAATGATGGACATCAAGGTTGGCTGCCATTTACAGGCTGCTACCTTTACAAACAATAAGCATTGCAACAACGTTTCCTATGCTCATATCCATGACTGCCTGCATAATGGGTTTTCGTTGTATTGGGTGATACCAGTTACTTGTACAGACCAATGTGGAAAGGGTGCGAGATGCCTCATCAATCAAACCACTTATCAAATTGGATGTGTACAAGATTCCTATTGCCATGTTTTAGGCGTAGGATTGGAAAAGAGGCACTGCGGAATTCAACACCAGATTCTTCAATATGCAGGTGGAATTCTATACTATATAGCACGCTATGTTGAATTCTTCATAATGGGACTAATCTATAGAATAACACGTTCACAGCACTTCTCGAAATGGCAAGTGGAAGGAGATTTGATTTTATTAGCCCCTGTTCCAATATTTGTGGCTGCAAGATTTTTATTTGGAGTGACACTTTTGCTTGCACTATTTATCCATACGTGGCAACGTAGGCATTACTCTATGTATGAAAACATTGAAACTTTTTTGCTAAACAACAATCTAAATCCTATTAGGTACGAATACAGAGAAATTAAGAAAATGAGCAGAGGTTACAAAGTTAAATTGGGTGAAGGAGGTTTCGGATCTGTATACAAAGGAAAACTTCGAAGTGGGTCAGAAGTAGCAATAAAGATGTTGAAAAAATCGAAAGCTGATGGACAAGAGTTTATGAATGAAGTGGCTAGCATTGGAAGAATACATCATGTGAATGTGGTACATCTCATTGGATATTGTGCTGAAGGACAAAAGCGTGCTCTAGTTTATGAGTACATGCCAAATGGTTCATTGGATAAATACATCTTCTCCAAAGGAGAAAGTGTCCCTTTAAGTTATGAGAAAACATATGAAATATCTCTTGGCATAGCTCGTGGGATTGCTTATCTTCATCAAGGCTGTGATGTGCAAATTCTACATTTTGATATTAAGCCTCACAATATTCTTCTAGATGATGACTTCATTCCAAAGGTTTCAGATTTTGGACTTGCAAAGCTATATCCTGTCGAAGATACGTCTGTTGCTTTAACTATGGCTAGAGGAACTTTAGGTTACATGGCTCCAGAACTATTCTACAATAATATTGGTGGCGTATCGAATAAGGCCGATGTGTATAGTTTTGGAATGCTTTTGATGGAAATGGGAAGTAGGAGAAGGAACTCAAATCCTCATGCAGAACATTCAAGCCAACAGTACTTCCCCTTTTGGATATATGATCAAATTAAAGATGAAAAAGAGACCCACATAGAAGATGCCTCAGAAGAGGATAAGATTTTGGTGAAAAAAATGTATGTAGTTGCGCTTTGGTGTATACAACTGAAACCAAATGACCGTCCTACAATGAAGAGAGTTGTGGAGATGCTTGAAGAAAAAGTTGAAAGTCTTGAAATGCCTCCTAAGCCTGTTTATTATCCCCATGAAACAGTTGAACATGACTGTGGAGACAACTCAAACCAAACATCATGGAATTGTTCAACTAGTTCTAGCGAAAATGTTGGCAAAACCAACACTAACATCCATGGGAGAGCAACGATTTGA 2145 0.3991 MVVLSSFWGSAQSLLALVAIIIELFQQTHGAQDRPFCAPSSCGKIGNISYPFRLKGDPPGCGLPRYELDCVKNVTVFSLFSGKYHVQNINYQTYSIQLSDAGLEEDTACFIPRYFISRWNFTYIGGPQNYATDPLTFWNGNETPDWPPYVAFLNCSDPVTDDPRYVEVNGRLCDSGGHVYAVLSSSAKFTMMDIKVGCHLQAATFTNNKHCNNVSYAHIHDCLHNGFSLYWVIPVTCTDQCGKGARCLINQTTYQIGCVQDSYCHVLGVGLEKRHCGIQHQILQYAGGILYYIARYVEFFIMGLIYRITRSQHFSKWQVEGDLILLAPVPIFVAARFLFGVTLLLALFIHTWQRRHYSMYENIETFLLNNNLNPIRYEYREIKKMSRGYKVKLGEGGFGSVYKGKLRSGSEVAIKMLKKSKADGQEFMNEVASIGRIHHVNVVHLIGYCAEGQKRALVYEYMPNGSLDKYIFSKGESVPLSYEKTYEISLGIARGIAYLHQGCDVQILHFDIKPHNILLDDDFIPKVSDFGLAKLYPVEDTSVALTMARGTLGYMAPELFYNNIGGVSNKADVYSFGMLLMEMGSRRRNSNPHAEHSSQQYFPFWIYDQIKDEKETHIEDASEEDKILVKKMYVVALWCIQLKPNDRPTMKRVVEMLEEKVESLEMPPKPVYYPHETVEHDCGDNSNQTSWNCSTSSSENVGKTNTNIHGRATI* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02596 714 Gene3D Transferase(Phosphotransferase) domain 1 462 667 - -
Phac11g02596 714 ProSiteProfiles Protein kinase domain profile. 387 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02596 714 MobiDBLite consensus disorder prediction 689 714 - -
Phac11g02596 714 Pfam Protein kinase domain 391 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02596 714 SUPERFAMILY Protein kinase-like (PK-like) 374 658 IPR011009 -
Phac11g02596 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 507 519 IPR008271 GO:0004672|GO:0006468
Phac11g02596 714 SMART serkin_6 389 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02596 714 FunFam serine/threonine-protein kinase PBS1-like 357 461 - -
Phac11g02596 714 ProSitePatterns Protein kinases ATP-binding region signature. 393 415 IPR017441 GO:0005524
Phac11g02596 714 PANTHER RUST RESISTANCE KINASE LR10-RELATED 359 681 IPR045874 GO:0004672
Phac11g02596 714 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
Phac11g02596 714 FunFam PR5-like receptor kinase 462 669 - -
Phac11g02596 714 Gene3D Phosphorylase Kinase; domain 1 364 461 - -
Phac11g02596 714 CDD STKc_IRAK 393 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02596 Phac-Chr11 36745120 36749181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02596 326 705 Receptor kinase-like Gene Family AT4G18250 43.622 1.20e-103 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac11g02596 Pkinase 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02596 - - pvu:PHAVU_011G198500g 1192.95