Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02568 ATGGTGGTCTTATCTTCTTTCTGCTGCTCTGCACAATCACTGCTTGCCCGTGTGGCTATCATTATTGTGCTATTCCGGCAAATTCACGCTGCCAAAGATCGTCCATTTTGTGCTCCTTCTTCCTGTGGGAAAATTGGCAACATAAGTTATCCTTTCCGACTCAAAGGCGACCCACCTGGTTGCGGCCTCCCAGGGTACGAATTAGATTGCGTAAAGAATGTGACAGTGTTCACTTTGTTTTCAGGGAAATACCATGTTCAGCATATCAACTACCAAACATACAGCATCCAATTGACTGATGCAGGTCTTGAGGAGGACATTGCTTGCTCTATTCCTCGCTATTTCATCTCTACATGGAACTTCACTGACATTGCTCCACTAACACTCTGGAATGGGAATTGGTATGAGTCTTCTTATAGGCCTCCATATGTAGCGTTTCTAAACTGTAGTGATCGAGTGAGTGATGATCCTCGATACGTGGAAGTGAATGGCAGACTTTGTGATTCTGGAGGCCATGTCTATGCTGTTCTTGGTTCTGGTGAACTCACAGTGATGGACATCAAGGTTGGGTGCCATTTAAAGGCTGCTACCTTTACAAACAAGAAGCATTGCAACAAAGTTTCCTATGCTGATATCCATGAGTGCCTGCATAATGGGTTTTGGTTGAATTGGGTGACACCAGTTATTTGTACAGACCAATGTGGAAAGGGTGTAGGATGCTTCTTCAATCAAACAACTAATAAAATTGAATGTCAACAAGATTACTATTGCCAAGTTTTAGGCCAAGAATTTGAAAAGAACCAATGCGGAAATCAAGATCAAATTCTCTTATATATACTTGCAATTCTATACTATATAGCAAGACTAATCTACACAATAAGACGTTCACCTAAGTATTGGGGATGGGAAGGAAATATCATTTCATTAGCCCCTATTCTAATATTTCTGGCTTCAAGATTTCTATTTGGAGTGCCACTTTTGCTTGCACTATTTATCCATAGGTGGCGACGTAGGCATTACTCAATGTATGAAAACATTGAAACTTTTTTGCTACACAACAATCTAAATCCTATTAGGTACGAATACAGAGAAATTAAGAAAATGAGCAGAGGTTACAAAGTTAAATTGGGTGAAGGAGGTTTCGGATCTGTATACAAAGGAAAACTTCGAAGTGGGTCAGAAGTAGCAATAAAGATGTTGAAAAAATCGAAAGCTGATGGACAAGAGTTTATGAATGAAGTGGCTAGCATTGGAAGAATACATCATGTGAATGTGGTACATCTCATTGGATATTGTGCTGAAGGACAAAAGCGTGCTCTAGTTTATGAGTACATGCCAAATGGTTCATTGGATAAATACATCTTCTCCAAAGAGGAAAGTATCCCTTTAAGTTATGAGAAAACATATGAAATATCTCTTGGCATAGCTCGTGGGATTGCTTATCTCCATCAAGGCTGTGATGTGCAAATTCTACATTTTGATATTAAGCCTCATAATATTCTTCTAGATGATGACTTCATTCCAAAGGTTTCAGATTTTGGACTTGCAAAGCTATATCCTGTCGAAGATACGTCTGTTGCTTTAACTATGGCTAGAGGAACTTTAGGTTACATGGCTCCAGAACTATTCTACAATAATATTGGTGGAGTATCCAATAAGGCCGATGTGTATAGTTTTGGAATGCTTTTGATGGAAATGGGAAGTAGGAGAAGGAACTCAAATCCTCATGCAGAACATTCAAGCCAACAGTACTTCCCCTTTTGGATATATGATCAAATTAAAGATGAAAAAGAGACCCACATAGAAGATACCTCAGAAGAGGATAAGATTTTGGTGAAAAAAATGTATGTAGTTGCGCTTTGGTGTATACAACTGAAACCAAATGATCGTCCTACAATGAGGAGAGTTGTGGAGATGCTTGAAGAAAAAGTTGAAAGTCTTGAAATGCCTCCTAAGCCTGTTTATTATCCCCATGAAACAGTTGAACATGACTGTGGAGATAACTCAAACCAAACATCATGGAGTGGTTCAACTAGTTCTAGCGAAAATGTTGGCAAAACCAACACTAACATCCATGGGAGAGCAACGATTTGA 2094 0.3921 MVVLSSFCCSAQSLLARVAIIIVLFRQIHAAKDRPFCAPSSCGKIGNISYPFRLKGDPPGCGLPGYELDCVKNVTVFTLFSGKYHVQHINYQTYSIQLTDAGLEEDIACSIPRYFISTWNFTDIAPLTLWNGNWYESSYRPPYVAFLNCSDRVSDDPRYVEVNGRLCDSGGHVYAVLGSGELTVMDIKVGCHLKAATFTNKKHCNKVSYADIHECLHNGFWLNWVTPVICTDQCGKGVGCFFNQTTNKIECQQDYYCQVLGQEFEKNQCGNQDQILLYILAILYYIARLIYTIRRSPKYWGWEGNIISLAPILIFLASRFLFGVPLLLALFIHRWRRRHYSMYENIETFLLHNNLNPIRYEYREIKKMSRGYKVKLGEGGFGSVYKGKLRSGSEVAIKMLKKSKADGQEFMNEVASIGRIHHVNVVHLIGYCAEGQKRALVYEYMPNGSLDKYIFSKEESIPLSYEKTYEISLGIARGIAYLHQGCDVQILHFDIKPHNILLDDDFIPKVSDFGLAKLYPVEDTSVALTMARGTLGYMAPELFYNNIGGVSNKADVYSFGMLLMEMGSRRRNSNPHAEHSSQQYFPFWIYDQIKDEKETHIEDTSEEDKILVKKMYVVALWCIQLKPNDRPTMRRVVEMLEEKVESLEMPPKPVYYPHETVEHDCGDNSNQTSWSGSTSSSENVGKTNTNIHGRATI* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02568 697 Gene3D Phosphorylase Kinase; domain 1 347 444 - -
Phac11g02568 697 ProSitePatterns Protein kinases ATP-binding region signature. 376 398 IPR017441 GO:0005524
Phac11g02568 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 490 502 IPR008271 GO:0004672|GO:0006468
Phac11g02568 697 CDD STKc_IRAK 376 642 - -
Phac11g02568 697 Pfam Protein kinase domain 374 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02568 697 Gene3D Transferase(Phosphotransferase) domain 1 445 650 - -
Phac11g02568 697 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
Phac11g02568 697 FunFam PR5-like receptor kinase 445 652 - -
Phac11g02568 697 MobiDBLite consensus disorder prediction 655 697 - -
Phac11g02568 697 ProSiteProfiles Protein kinase domain profile. 370 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02568 697 FunFam serine/threonine-protein kinase PBS1-like 340 444 - -
Phac11g02568 697 SMART serkin_6 372 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02568 697 MobiDBLite consensus disorder prediction 666 697 - -
Phac11g02568 697 SUPERFAMILY Protein kinase-like (PK-like) 357 641 IPR011009 -
Phac11g02568 697 PANTHER RUST RESISTANCE KINASE LR10-RELATED 343 663 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02568 Phac-Chr11 36523589 36543209 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02568 28 654 Receptor kinase-like Gene Family AT1G66910 33.687 3.94e-105 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac11g02568 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02568 - - pvu:PHAVU_011G197500g 1204.89