Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02565 ATGAAATTTATCCTCACAGGAGTTATCTATAAAATAACACGTTCACATCACTTTTCGAAATGGCAAGTGGAACAAGATTTGATTTTATTTGCCCCTGTTCCAATATTTGTGGCTGCAAGATTTCTATTTGGAGTGGCACTTTTGCTTGCATTATTTATCCATACGTGGCGACGTAGGCATTACTCGATGTATGAAAACATTGAAACTTTTTTGCTACACAACAATCTAAATCCTATTAGGTACGGATACAGAGAAATTAAGAAAATGAGCAGAGGTTACAAGGTTAAATTGGGTGAAGGAGGTTACGGATCTGTATACAAAGGAAAACTTCGAAGTGGGCCAGAAGTAGCAATAAAGATGTTGAAAAAATCGAAAGCTGATGGACAAGAGTTTATGAATGAAGTGGCTAGCATTGGAAGAATACATCATGTGAATGTGGTACATCTCATAGGATATTGTGCTGAAGGACAAAAGCGTGCTCTAGTTTATGAGTACATGCCAAATGGTTCATTGGATAAATACATCTTCTCTAAAGAGGAAAGCTGTGATGTGCAAATTCTACATTTTGATATTAAGCCTCACAATATTCTTCTAGATGATGACTTTGTTCCAAAGGTTTCAGATTTTGGACTTGCAAAGCTATTTCCTGTCGAAGATACGTCGGTTGCTTTAACTATGGCTAGAGGAACTTTAGGTTACATGGCTCCAGAATTATTCTACAATAATATAGGTGGAGTATCCAATAAGGTGGTTGTGTATAGTTTTGGAATGCTTTTGATGGAAATGGGAAGTAGAAGAAGGAACTCAAATCCTCATGCAGAACATTCAAGCCAACAGTACTTCCCCTTTTGGATATATGATCAAATTAAAGATGAAAAAGAAACTCACATAGAAGATGCCTCAGAAGAGGATAAGATTTTGGTGAAAAAAATGTATGTAGTTGCCCTTTGGTGTATACAATTGAAACCAAATGACCGTCCTTCAATGAAGAGAGTTGTGGAGATGCTTGAAGAAAAAGTTGAAAGTCTTGAAATGCCTCCTAAGCCTGTTTATTATCCCCATGAAACAGTTGGACATGATTGTGATGACAACTCAAACCAAACATCATGGAGTGGTTCAACTAGTTCTAGCGAAAATCTTGGCAAAACCAACACTAACATCCATGGGAGAGCAACGCTTTAA 1182 0.3706 MKFILTGVIYKITRSHHFSKWQVEQDLILFAPVPIFVAARFLFGVALLLALFIHTWRRRHYSMYENIETFLLHNNLNPIRYGYREIKKMSRGYKVKLGEGGYGSVYKGKLRSGPEVAIKMLKKSKADGQEFMNEVASIGRIHHVNVVHLIGYCAEGQKRALVYEYMPNGSLDKYIFSKEESCDVQILHFDIKPHNILLDDDFVPKVSDFGLAKLFPVEDTSVALTMARGTLGYMAPELFYNNIGGVSNKVVVYSFGMLLMEMGSRRRNSNPHAEHSSQQYFPFWIYDQIKDEKETHIEDASEEDKILVKKMYVVALWCIQLKPNDRPSMKRVVEMLEEKVESLEMPPKPVYYPHETVGHDCDDNSNQTSWSGSTSSSENLGKTNTNIHGRATL* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02565 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Phac11g02565 393 FunFam serine/threonine-protein kinase PBS1-like 61 165 - -
Phac11g02565 393 ProSiteProfiles Protein kinase domain profile. 91 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02565 393 Gene3D Phosphorylase Kinase; domain 1 68 165 - -
Phac11g02565 393 SMART serkin_6 93 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02565 393 MobiDBLite consensus disorder prediction 354 393 - -
Phac11g02565 393 Gene3D Transferase(Phosphotransferase) domain 1 166 351 - -
Phac11g02565 393 Pfam Protein kinase domain 185 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02565 393 ProSitePatterns Protein kinases ATP-binding region signature. 97 119 IPR017441 GO:0005524
Phac11g02565 393 PANTHER RUST RESISTANCE KINASE LR10-RELATED 64 361 IPR045874 GO:0004672
Phac11g02565 393 SUPERFAMILY Protein kinase-like (PK-like) 79 337 IPR011009 -
Phac11g02565 393 MobiDBLite consensus disorder prediction 362 393 - -
Phac11g02565 393 Pfam Protein tyrosine and serine/threonine kinase 95 180 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02565 Phac-Chr11 36449765 36451023 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02565 38 384 Receptor kinase-like Gene Family AT4G18250 40.992 2.57e-91 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac11g02565 Pkinase 8.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02565 - - pvu:PHAVU_011G197500g 659.833