Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02562 ATGGCCTCTTCAAATTCACCATGTGCAGCATGCAAGTTCTTGCGTCGCAAATGCCAACCTGAGTGTGCTTTTGCACCATATTTTCCTCCTGACCAACCTCAGAAGTTTGCAAATGTTCATAGAATCTTTGGGGCCAGCAATGTCACCAAGCTTCTCAACGATTTGCACCCTCATCAACGTGAAGATGCTGTGAATTCCCTTGCTTATGAAGCTGAGATGAGACTCCGTGACCCTGTGTATGGCTGTGTTGGAGTGATATCCCTTCTACAGCACCAACTTCGCCAGCTTCAAATGGATCTCTACTGTGCCAAATCTGAGCTCTCTAGGTACCAAAACCTAAGCATCACCACCAATCACACCCTCATGGCCTCTGAATCCGCCGCAGCCTTCCACCACCACCACCAGAATACCACTGCTAATACCTTTGCCCGAGACCATCACTATCACTTCCACCACCACCAGTTCTTCCCCAGAGACCAACACCAACAAGTAGCAAGAACCTTTGATGGAGGCAACAACTACGATGCAAGCCTCTTGGCCATGAACATATCCGCCAGCTTAGGGCAACTCAACCAGCTTCAGCATCAGAGTGCTGCTGGCGGCGGCGACGACCGCCACACTGCCAACCGCTCCTAG 636 0.5079 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKSELSRYQNLSITTNHTLMASESAAAFHHHHQNTTANTFARDHHYHFHHHQFFPRDQHQQVARTFDGGNNYDASLLAMNISASLGQLNQLQHQSAAGGGDDRHTANRS* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02562 211 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Phac11g02562 211 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 139 - -
Phac11g02562 211 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02562 Phac-Chr11 36411754 36412515 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02562 2 211 AS2 family AT1G65620 62.963 7.31e-80 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac11g02562 LOB 2.9e-42 No_clan