Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02557 ATGGCCATGGAAGGTTGTTCAAAGTTCTTTGGAAGCTCAAAACCCTACTTGGCTATGATTTCTTTACAGTTTGGTTATGCTGGCATGACCATTATTACTAAGATTTCCCTCAACCAAGGCATGAGTCACTATGTTCTTGTGGTTTATCGTCACGCTTTTGCTACCATCGCCATAGCTCCTTTTGCATTCATTTTTGAGAGGAAACATCAACCGAAGATAACATTCCCAATTTTCATGCAAATTTTTATCCTAGCTCTTCTAGGGCCAGTGATTGATCAAAATTTATTTTATGCTGGGTTGAAACTCACATCCCCAACTTTCTCATGTGCAATGAGCAACATGCTTCCAGCTATGACTTTTGTGATAGCACTGTTCTGCAGGATGGAGAAGATAAACATAAAGGAAGTGAGAAGCATAGCAAAGATAGTGGGAACTTTAGTGACAGTTGCAGGAGCTATGCTAATGACCTTATACAGAGGTCCTACTGTAGAGATGGTTTGGTTCAACCATGCTCACTATAAAGCCAATGGATCATTGGACAAAGATTGGTTATTGGGGTGCTTTTTCCTTATCATTTCCACCTTTGCTTGGGCTTCTCTTTTTATTTTACAAGCAAAAGCTATAGAGACATACAAGAATCATCAGCTAACCCTAACTTCACTTGTGTGTCTTATAGGCACTGTTCAAGCTACTGTTGTTACTTGTGTTCTTGAACACAACCCTTCTGTTTGGAAAATTGGATGGGATATAAACTTACTTACTGCTGCATATTCAGGGATTGTTTCATCAAGCATATCATACTATGTGCAAGGACTTGTAATTAAGAAGAAAGGACCTGTCTTTGCAACTTCCTTTAGCCCTTTAATGATGATCATTTCTGCTATCATGGGTTACTTTATCCTTGCAGAAAAAATTTATCTTGGAGGTGTGATTGGTGCCATCTTAATTGTTATAGGTTTATACTCAGTTCTGTGGGGAAAGCACAAAGAACAAATAGAGAGTAAAGTGGCAGATGAAATTCCCTTGCCAGATGCTGAAAGTTCAGTGATAGAAGAGCTGTTTGATGCCAGAGATAACTTTAGTGAAGAAAAATGTGTTGAGAAAGAAGAACCCATCAATATCAAGTTCTCTTCCATTGTAATAACCTTGTCTGTTCAACAGTCTCCCACAAGATAA 1176 0.3852 MAMEGCSKFFGSSKPYLAMISLQFGYAGMTIITKISLNQGMSHYVLVVYRHAFATIAIAPFAFIFERKHQPKITFPIFMQIFILALLGPVIDQNLFYAGLKLTSPTFSCAMSNMLPAMTFVIALFCRMEKINIKEVRSIAKIVGTLVTVAGAMLMTLYRGPTVEMVWFNHAHYKANGSLDKDWLLGCFFLIISTFAWASLFILQAKAIETYKNHQLTLTSLVCLIGTVQATVVTCVLEHNPSVWKIGWDINLLTAAYSGIVSSSISYYVQGLVIKKKGPVFATSFSPLMMIISAIMGYFILAEKIYLGGVIGAILIVIGLYSVLWGKHKEQIESKVADEIPLPDAESSVIEELFDARDNFSEEKCVEKEEPINIKFSSIVITLSVQQSPTR* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02557 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 159 - -
Phac11g02557 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 329 - -
Phac11g02557 391 PANTHER WAT1-RELATED PROTEIN 14 336 IPR030184 GO:0016020|GO:0022857
Phac11g02557 391 Pfam EamA-like transporter family 15 155 IPR000620 GO:0016020
Phac11g02557 391 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02557 Phac-Chr11 36362270 36365928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02557 1 388 Nodulin-like Gene Family AT5G07050 62.594 1.21e-173 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02557 - - gmx:100804390 598.586