Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02554 ATGAGGAAGAAGCTCGATACCCGTTTCCCTGCTGCTCGGATAAAGAAGATAATGCAAGCAGATGAGGATGTTGGAAAGATAGCACTGGCTGTTCCTGTTTTAGTTTCTAAAGCTCTAGAACTATTTTTGCAAGATCTTTGTGACCGTACTTATGAAATAACTCTTCAAAGAGGAGCAAAGACCATGAATTCATTGCATTTAAAACACTGTGTACAAAGCTATAATGTCTTTGACTTTCTGAGGGACGTTGTCAGCAGAGTTCCTGATTACGGTCATGGCCATGGCCATGGCCATGCTGAGGCTGGTGCTGATGATCGGGCCATTTCAAAAAGAAGGAAAGCTGTCGGTGATGATGGTAATGACAGTGATGAAGAGGCTAAGAGGGGCAAGATGCAAGAGGTGAGCCACACTGGCAGTACTGGTAGTAGGGGAAGAGGCCGAGGTAGAGGAAGAGGCCGTGGCCGAGGGCGACCACCTTTAGTAAGAGACACATATCATCAGGATGCTGAATCTGAGCCTTGCACTTCTGTTCAGCCGAGCAACCAACAAAGTGCAAACCCAACTGTTGGAGTGGACAGTGGTTCTGAGCCAAAGGATTTACCAAAGGAGGAGAATATTGCAGTTCCTGTTGTAAGCACTGATTCACTCCGGAATATTGATCTGAATGCCGTTACGAATGAAAACGATGACAAGAAGGCGAGCATGGCAGCTGATACCTCATTGCCGGAACCTCCTTCAACAGAGGTCAAGCATGAAGAGATTCTGGGATGGCCCCTTTCTGATGTGGACAAGATGGCCATTGATTCTACACAGCTTGCCCAGCTGGGTAGGCCACTAGAAGAGGAGGAGGAAGATTATGACGAGGAGGAGGGGTAA 876 0.4737 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLRDVVSRVPDYGHGHGHGHAEAGADDRAISKRRKAVGDDGNDSDEEAKRGKMQEVSHTGSTGSRGRGRGRGRGRGRGRPPLVRDTYHQDAESEPCTSVQPSNQQSANPTVGVDSGSEPKDLPKEENIAVPVVSTDSLRNIDLNAVTNENDDKKASMAADTSLPEPPSTEVKHEEILGWPLSDVDKMAIDSTQLAQLGRPLEEEEEDYDEEEG* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02554 291 MobiDBLite consensus disorder prediction 224 250 - -
Phac11g02554 291 MobiDBLite consensus disorder prediction 170 191 - -
Phac11g02554 291 SUPERFAMILY Histone-fold 4 91 IPR009072 GO:0046982
Phac11g02554 291 MobiDBLite consensus disorder prediction 269 291 - -
Phac11g02554 291 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 126 - -
Phac11g02554 291 MobiDBLite consensus disorder prediction 112 209 - -
Phac11g02554 291 MobiDBLite consensus disorder prediction 112 132 - -
Phac11g02554 291 FunFam dr1-associated corepressor homolog 1 86 - -
Phac11g02554 291 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Phac11g02554 291 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02554 Phac-Chr11 36336761 36341772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02554 1 277 CCAAT-HAP5 Transcription Factor Family AT3G12480 49.481 5.24e-79 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Phac11g02554 CBFD_NFYB_HMF 2.2e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02554 K21752 - gmx:100814712 437.187