Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02550 ATGGAGGGAAAACAACTGAATGTGAGATCAATATATTCCTTAATTTTTCTGTTTTTGCAAGGCTTCAAACCAGTTGTTACAGAGGCACAATCCCCCAACTATGTGGGAGATGACTGCAATTCCACCACCACAACATCTCTCAGCAGTGCATACAAAGCCAACCTTAACAGTGTCCTCTCATGGCTATCCTCAGATGCAGCCACAAGCAAAGGCTATAACTACAACAGCTTTGGCAACAACACCTCAGGTGCAGATGCTGCTGTGTATGGCCTCTATGATTGCCGTGGTGATGTTTCTGGATACTTTTGTCAGTTCTGTGTGTCCACTGCTTCCAGAGAAGTTCTTCAGCGCTGCTCCAACAGGGTATCTGCTATTATATGGTATGATTTCTGCATCTTAAGGTACTCAAATCAGAACTTCTTTGGGAATGTTACAGTAGACCCATCATGGAATCATACTGGGCCAAAAAATGTCACTAGTGCGGAAGAGATTCAGAAGGGTGAGGGCTTTATGAGAAGTTTGATCAGAAAAGCTACTGTGGAGACCAACCAGTTGTACTATATGGATGGCTTCAATTTGAGTTCCTCTCAGAGAAGGTATGGAATGGTTCAATGCAGCAGAGATCTCACAAATGAAGGGTGCAGCCAGTGTTTGGAGGCCATGTTAGCAAAAGTTCCCAAATGTTGTGAGCATAAGTTGGGGTGGCAAGTTTCGACTGCAAGTTGTCTCATAAAGTATGATGACTATATTTTCTACCTTTTTCACAATCCAGCATCTTCTGTTTCTGTGCCTGATACACAAATAGCCAAACAGAGGAGTGGTGGTAAGGCAAAACTATTGATCATTGGCTTAAGCGTGTTGGGGGGAGTAGCTTTGCTATGTTTCAGTGTTTATTGCTTCTGGTTCAGGAAAAGAACTAGAAGTGGAAGAAAAACAGGAGGGCGTATTCCTGACACCATTCGTCTGTCATCATATCACAATGTTGAAACTGAGGAAACACTGAATCCAGACCTTCCTACAATCCCATTAAACACGATTCTGCAAAGTACTGATAACTTTTCAGAAGCATTTAAGCTAGGGGAAGGTGGATTCGGCCCAGTTTACAAGGGAACTCTACCAGATGGAAGAAAAATTGCAGTGAAAAGACTCTCAGAATCTTCTGGTCAAGGGTCAGAAGAGTTCAAGAATGAAGTAATGTTTATAGCTAAATTGCAGCATCGCAACCTTGTAAGACTTTTGGCATGCTGCTTGGAGGAAAAAGAGAAGATACTTGTATATGAGTATATGACCAATGCAAGTCTCGACTTTCACCTCTTTGATGAGAGAAAGAAAAGACAGCTTGATTGGAAACTAAGATTAAGCATTATACATGGCATAGCAAAAGGTCTCTTATACCTTCATGAGGATTCCAGACTCAAAGTTATTCATAGAGATCTCAAAGCTAGTAATGTTTTATTAGATGATGAGATGAATCCTAAAATATCAGATTTTGGATTGGCAAGATCATTTGAGAAAGGCCAGAACCAAGCAAATACAAGACGAGTAATGGGCACATATGGATACATGGCTCCAGAGTACGCTATGGAAGGATTGTTTTCAGTGAAATCTGATGTTTTCAGTTATGGAGTTCTTGTTCTAGAAATCATTTGTGGCAAAAAGAACAGTGGATTCTATCTATCAGAATGTGGTCAAAGTCTTACACTATATGCTTGGAAAGTTTGGTGTGCAGGAAAATGTTTGGAACTAATGGATCCAGTGTTGGAGGAATGTTGTGTGGAGAGTGAAGTTGTGAAGTGCATACACATTGGTCTGTTGTGTGTTCAAGAAGATGCAGCAGATAGACCAACAATGTCCACTGTGGTTGTAATGCTAGCAAGTGACATGATGTCTCTTCCAAAACGTAACCAACCAGCATTTTCAGTAGGAAGAATGACCTTAGACGATGCATCTACATCAAAAAGTTCCAAGAATCTTTCCATTAATCATGTCACTGTCTCTAACATTTTTCCAAGATAA 2016 0.4072 MEGKQLNVRSIYSLIFLFLQGFKPVVTEAQSPNYVGDDCNSTTTTSLSSAYKANLNSVLSWLSSDAATSKGYNYNSFGNNTSGADAAVYGLYDCRGDVSGYFCQFCVSTASREVLQRCSNRVSAIIWYDFCILRYSNQNFFGNVTVDPSWNHTGPKNVTSAEEIQKGEGFMRSLIRKATVETNQLYYMDGFNLSSSQRRYGMVQCSRDLTNEGCSQCLEAMLAKVPKCCEHKLGWQVSTASCLIKYDDYIFYLFHNPASSVSVPDTQIAKQRSGGKAKLLIIGLSVLGGVALLCFSVYCFWFRKRTRSGRKTGGRIPDTIRLSSYHNVETEETLNPDLPTIPLNTILQSTDNFSEAFKLGEGGFGPVYKGTLPDGRKIAVKRLSESSGQGSEEFKNEVMFIAKLQHRNLVRLLACCLEEKEKILVYEYMTNASLDFHLFDERKKRQLDWKLRLSIIHGIAKGLLYLHEDSRLKVIHRDLKASNVLLDDEMNPKISDFGLARSFEKGQNQANTRRVMGTYGYMAPEYAMEGLFSVKSDVFSYGVLVLEIICGKKNSGFYLSECGQSLTLYAWKVWCAGKCLELMDPVLEECCVESEVVKCIHIGLLCVQEDAADRPTMSTVVVMLASDMMSLPKRNQPAFSVGRMTLDDASTSKSSKNLSINHVTVSNIFPR* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02550 671 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 666 - -
Phac11g02550 671 Gene3D Phosphorylase Kinase; domain 1 318 428 - -
Phac11g02550 671 FunFam Cysteine-rich receptor-like protein kinase 10 149 251 - -
Phac11g02550 671 SMART serkin_6 353 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02550 671 Gene3D Transferase(Phosphotransferase) domain 1 429 638 - -
Phac11g02550 671 ProSiteProfiles Gnk2-homologous domain profile. 33 140 IPR002902 -
Phac11g02550 671 Pfam Salt stress response/antifungal 39 138 IPR002902 -
Phac11g02550 671 Pfam Salt stress response/antifungal 171 249 IPR002902 -
Phac11g02550 671 FunFam Cysteine-rich receptor-like protein kinase 28 35 139 - -
Phac11g02550 671 Gene3D - 150 251 IPR038408 -
Phac11g02550 671 Gene3D - 32 140 IPR038408 -
Phac11g02550 671 ProSiteProfiles Gnk2-homologous domain profile. 146 251 IPR002902 -
Phac11g02550 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Phac11g02550 671 ProSiteProfiles Protein kinase domain profile. 353 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02550 671 FunFam Liguleless narrow1 429 632 - -
Phac11g02550 671 Pfam Domain of unknown function (DUF3403) 626 671 IPR021820 GO:0004674
Phac11g02550 671 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 318 428 - -
Phac11g02550 671 Pfam Protein tyrosine and serine/threonine kinase 358 622 IPR001245 GO:0004672|GO:0006468
Phac11g02550 671 CDD STKc_IRAK 359 624 - -
Phac11g02550 671 SUPERFAMILY Protein kinase-like (PK-like) 338 656 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02550 Phac-Chr11 36316797 36320100 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02550 9 671 Receptor kinase-like Gene Family AT4G05200 42.006 9.16e-177 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac11g02550 PK_Tyr_Ser-Thr 9.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02550 - - gmx:100796972 1132.09