Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02548 ATGGCTCCTGAGTACGCTATGGAAGGATTGTTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTGTTCTAGAAATCATTTGTGGAAGAAAGAACAACGGATTCTATCTGTCAGAACATGGTAAAACTCTTCTTTTATATGCTTGGAGAACATGGTGTGAGGGAAAATGTTTGGAATTGATGGATCCAATGCTGGAAAAATCCTTCAAAGGCAGTGAAGTTGAGAAGTGCATACACATTGCTTTGTTGTGCGTTCAAGAAAATGCAACATACAGACCAACCATGTCAGATGTTGTTGTTATGCTAGGGAGTGACAATATCTTGAAGACTTCAACTAGGTTGATCATCCCCCTATTTTCAACATGA 369 0.3875 MAPEYAMEGLFSVKSDVFSFGVLVLEIICGRKNNGFYLSEHGKTLLLYAWRTWCEGKCLELMDPMLEKSFKGSEVEKCIHIALLCVQENATYRPTMSDVVVMLGSDNILKTSTRLIIPLFST* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02548 122 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 105 - -
Phac11g02548 122 Pfam Protein tyrosine and serine/threonine kinase 1 102 IPR001245 GO:0004672|GO:0006468
Phac11g02548 122 SUPERFAMILY Protein kinase-like (PK-like) 1 102 IPR011009 -
Phac11g02548 122 Gene3D Transferase(Phosphotransferase) domain 1 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02548 Phac-Chr11 36267272 36273224 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02548 1 108 Receptor kinase-like Gene Family AT4G23140 56.481 7.20e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac11g02548 PK_Tyr_Ser-Thr 8.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02548 - - pvu:PHAVU_011G193700g 184.111