Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02539 ATGGGGATGAAAACAAAAAAAATGATGATTCCTATTAGGGTTGTTCTTAGTTTCATGCTCCTCCTTTTCATCACAGCAAGTGCTCAAGTTCCAATTTACATGAACAATTTTTGTGACAACTCAACTTTTGTTAGCCCTTCATACAAAGACAACGTTGACACCTTCCTCTCATGGGTAACCACAGACTCATACAAAGGAGATGGATACAACTACACCACTGTAAATAACAACAACCACAACAATGATGATGATGCTGTTTATGGATTGTACAGCTGCAGATACGACATCACAGGGTATTTTTGCCAGTTCTGCATCACCACTGCTAAAAAGGAACTCTCTCAAAGGTGTCCCAACACTGCAAGAGGTATCATATGGTATGATGTATGCATCATCCGTTACTCAAACCAAAATTTCATTGGCAAAGTTAGTCTAACCCCAGTGTGGAACATTACCGGAACCAGAAAAATCAAGGACTCATCAGAAGTTAAGAAAGCTGAGGATTCTATGGAGGGTTTGATCAGAAAAGCAACTGTAGAGAGCAAGACATTTTGGGCAGTGGATGAGTTTGAATGGATTGAGAATGAGAAAAGATATGGTTGGGTGCAGTGTGATAGAAGTTTTGGAAATGATGAGTGTGGTGAGTGCTTGCATGCAACGTTAGACATATTTCCAGAGTGTTGTTCCACAAATGTACAGTGGGCAATTTTTGGTCCAAGCTGTAGCATCAGGATGGATGATCAAAATTTCTACCAGACTTCAGGCAATGGAGGTACTAGTAGTAAGTCAAGAAATTTGATAATCTCGTTTAGTGTGTTGGGTGCTGTAGCTCTACTATGTTTCAGTGTCTACTGCTTCTGGTACAGGAAAAGAATGATGCTTGATGAGGAAAAATTGAATGGAGATCTGCCTACAATCCCATTAATCGCAGTTCTACATAGTACTAATAACTTTTCTGAAGCATTTAAATTAGGGGAAGGTGGATTTGGCCCCGTTTACAAGGGAATTCTACCAGATGGAAGACAAATTGCAGTGAAAAGGCTCTCAAAATTTTCTGGTCAGGGCTCACAGGAGTTCAAGAATGAAGTAATGTTTATAGCTAAATTGCAGCATCGTAACCTTGTGAGACTTTTGGGGTGCTGCTTGGAGGAAAATGAGAAGATACTAGTATATGAGTATATGTGTAATTCAAGCCTCGACTTTCACCTCTTTGGTGATGTTTTCAGCTTTGGAGTTCTTGTCCTAGAAATCATTTGTGGAAGAAAGAACAGTGGATTCCATCGATCAGAACATGGTCAAAGTCTTCTTTTATATGCATGGAGCATATGGTGTGCAGGAAAATGTTTGGAATTGATGGATCCAGCACTGATAAAATCCTTCAGAGCTAGTGAGGTTGTCAAGTGCTTACACATTGGTTTGCTGTGTGTTCAACAAGATGCAGCAGATAGACCAACCATGTCTACGGTTGTTCTAATGCTAGGTAGTGAATCAATGGCCCTTCCAAAACCCAATCACCCTGCATTTTCTGTTGGAAAATTGACCTCTGAAGAAGCATCAGCTTCAAGAAGTTTCAAGAATCTTTCTATTAATGATGTAACAGTCTCAACTGATTTAGCAAGGGTTAGTGTTAGCTTCTTGTTCCTCCTTTTCACCACAACAAGAGCTCAAGCACCAATTTACATGTACAATTTTTGTGAAAACTCAACTTCTGTTAGCCCTTCATACAAAGCCAACGTTGACACCCTCCTCTCATGGGTAACCACAGACTCAGATCAAAGTGATGGATACAACTACACCACTGTAAACAACAACAACAATGATGATGATGCTGTTTATGGATTGTACAGCTGCAGATACGACATCACAGGGTATTTTTGCCGGTTCTGCATCACCACTGCTGCCAGTGAACTCTCTCGGAGGTGCCCCAACACTGTAAGAGCTATCATTTGGTATGATATATGCATCATCCGTTACTCAAACCAGAGTTTCAGTGGCAAAGTTAGTTTAACCCCAACATGGAATATTACAGGACCCAGAAAAATCAAGGATTCAGCAGAAGCTAAGAAAGTTGAGGATTCTATGGAGAGTTTGATTACAAAAGTAACCATAGATACCAAGAAGTTTTGGGCAGTGGATGAGTTTGATTGGGTTGACAATGAGAAAAGATATGGTTGGGTGCAGTGTGACAGGGATATTCCAAGGGATGAGTGTGGTGAGTGTTTGCATGCATTGTTAGACATATTTCCACAGTGTTGTTCCACAAATGCACAGTGGGCAGTTTTTGGTCCAAGCTGTGGAATCAGGATGGATGATGAAAAGTTCTACCAAAGTTCAGGCAATGGAGGTACTAGTAGGTCAAGAAAGTTAATCATTTCCTCTAGTGTGTTGGGGTCTGTAGCCCTACTATGTTTCAGTGCCTACTGCTTCTGGTACAGGAAAAGAGTAAGAAAAGATAAGATGACGTTTGATGAGGAAAAATTGAATGGAGATCTGCCTACAATTCCATTAATTGCAGTTCTACATAGTACTAATAACTTTTCAGAAGAATCTATATTAGGGGAAGGTGGATTTGGCTCTGTTTACAAGGGAATTCTACCAGATGGAAGACAAATCGCAGTGAAAAGGCTCTCAAAATTTTCTGCTCAGGGCTCACAGGAGTTCAAGAATGAAGTAATGTTTATAGCTAAATTGCAGCATCGTAACCTTGTAAGACTTTTGGGGTACTGCTTGGAGGAAAATGAGAAGATACTAGTATATGAGTATATGTGTAATGCAAGCCTCGACTTTCACCTCTTTTGTGATGATGAGAAGAGAAAGCAACTTGATTGGGGACTAAGATTCAGCATTATCAATGGAATAGCAAGAGGTATTTTATATCTTCATGAGGACTCTCGACTCAAAGTAATTCATAGAGATCTCAAAGCTAGCAATGTTCTATTAGACGATGAGATGAATCCCAAGATCTCAGATTTTGGATTGGCCAGGGCATTTGAAATAGGAGAGAACCAAGCCAAGACAAAACGAGTAGTGGGCACCTATGGATACATGGCTCCAGAGTATGCTATGGAAGGATTATTTTCTGTGAAATCAGATGTTTTCAGCTTTGGAGTTCTTGTCCTAGAAATCATTTGTGGAAGAAAGAACAGTGGATTCCATCGATCAGAACATGGTCAAAGTCTTCTTTTATATGCTTGGAGCATATGGTGTGCAGGAAAATGTTTGGAATTGATGGATCCAGCACTGATAAAATCCTTCAGAGCTAGTGAGGTTGTCAAGTGCTTACACATTGGTTTGCTGTGTGTTCAACAAGATGCAGCAGATAGACCAACCATGTCTACGGTTGTTCTAATGCTAGGTAGTGAATCAATGGCCCTTCCAAAACCCAATCACCCTGCATTTTCTGTTGGAAAATTGACCTCTAAAGAAGCATCAGCTTCAGAAAGTTCCAAGAATCGTTCTATCAATGATGTAACAGTCTCAGCCGCACAAACACAGATATATCTGGGAAGTAATTGCCAAAACACCTCCCAAGAGTCTTTCAGCAGTGCATACCAAACCAATCTTGATAAGATGCTCACATGGATGTCCTCTGATGCAGCCACAAGCAAAGGCTATAACCACACCAGCATAGGCATCAACACCACAGTGTATGGCCTCTATGATTGCCGTGGTGATGTTGTTGGACACTTTTGTGAATTCTGTGTCTCCTTCGCAGCCAGAGAAGCCCCTAAACGCTGCCCCAATAGGGTATCTGCTATGGTGTGGTATGAGTACTGCATTCTAAGGTACTCTAATGAGAGCTTCTTTGGGAAAATTCTCACACACCCCACATGGCATGGGTTTGGAACAAAAAAGGTATCCAACATGGCAGAGGTTCTTAAAGGTGAAGGTTTTGTGAAAAGTTTGATCAGAAAAGCAACTGAGGAAACCAACCAGTTGTACTATTTGGGTGGCTTCAATTTGAGTTCCACTCAGAGAAGGTATGGCATGGTGCACTGCAGCAGAGATCTCACAAATGAAGGTTGCAGAGAGTGTTTGGAGGCTGTATTGGCACAAGTTCACAAATGTTGTGAACAAAAAATAGGATGGTTTATTTGGTCTGGAACTTGTATGATAAGGTATGATGATCAAATGTTCTACCTTCTTAACAACCAAACATCTTCACTTCCTGCTTCAAATCAGCAAACAGATAAAAAAAGGGGTTATAAGAGGTCAAAAATCTTGATCATTAGCATCAGTTTGATGGGGTCAATATTTCTACTGTGTTTGAGCTTACATCGCTTCTGGTACAGGAGAAGAGTTAGAAAAGATGGGTTTCGTCTATCTTCGTTTCATAAAATTCAAACAGAGGAATCATGGACCACAGACCTGCGTATTATCCCACTAACCACAATTCTGCAGAGTACTGATAACTTTTCAGAAGCATGTAAATTAGGAGAAGGAGGATTTGGCAGTGTTTACAAGGGAGTTCTAGCAGATGGAACACAAATTGCAGTGAAAAGGCTCTCAAAGTTTTCTGGTCAAGGCTCGGAGGAGTTTAATAACGAAGTCCTGTTTATAGCCAATTTGCAACATCGCAATCTTGTGAGACTTTTGGCATGTTGCTTGGACCAAAACGAAAGCATACTAGTATATGAGTATTTGCAGAACAAAAGTTTAGACTTTCACCTCTTTGGAACTAAAGAAGTTGTATTGATTTCCTTTAGTGGATACATGGCTCCAGAGTATGTCATGCAAGGACTGTTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTGTTCTAGAAATCATGTATGGGAGAAAGAACAGTGGATTGTATATGTCAGAACATGGTCAAACTCTTCTTTTATATGCTTGGAGAACATGGAGTGCAGGAAAATGTTTGGAAATGATTGATCCAATGCTGGAAAAATCCTTCATGGGGAGTGAAGTTGAGAGGTGTATACACATTGGTTTGTTGTGTGTTCAAGAAGATGCAAAAGATAGACCAACAATGTCTGATGTTGTTGTAATGCTTGCAAGTGATACAATGGTTCTTCCAAAACCAAAGCACCCTGCATTTTCAATTGGAATAATGGCCTCAGAGGAAGTTCATACATCAAAAAGTTCCAAGATTGTTTCCAATAATGATCTAACAGTCTCTGTTTCTTTACCAAGGTGA 5163 0.4025 MGMKTKKMMIPIRVVLSFMLLLFITASAQVPIYMNNFCDNSTFVSPSYKDNVDTFLSWVTTDSYKGDGYNYTTVNNNNHNNDDDAVYGLYSCRYDITGYFCQFCITTAKKELSQRCPNTARGIIWYDVCIIRYSNQNFIGKVSLTPVWNITGTRKIKDSSEVKKAEDSMEGLIRKATVESKTFWAVDEFEWIENEKRYGWVQCDRSFGNDECGECLHATLDIFPECCSTNVQWAIFGPSCSIRMDDQNFYQTSGNGGTSSKSRNLIISFSVLGAVALLCFSVYCFWYRKRMMLDEEKLNGDLPTIPLIAVLHSTNNFSEAFKLGEGGFGPVYKGILPDGRQIAVKRLSKFSGQGSQEFKNEVMFIAKLQHRNLVRLLGCCLEENEKILVYEYMCNSSLDFHLFGDVFSFGVLVLEIICGRKNSGFHRSEHGQSLLLYAWSIWCAGKCLELMDPALIKSFRASEVVKCLHIGLLCVQQDAADRPTMSTVVLMLGSESMALPKPNHPAFSVGKLTSEEASASRSFKNLSINDVTVSTDLARVSVSFLFLLFTTTRAQAPIYMYNFCENSTSVSPSYKANVDTLLSWVTTDSDQSDGYNYTTVNNNNNDDDAVYGLYSCRYDITGYFCRFCITTAASELSRRCPNTVRAIIWYDICIIRYSNQSFSGKVSLTPTWNITGPRKIKDSAEAKKVEDSMESLITKVTIDTKKFWAVDEFDWVDNEKRYGWVQCDRDIPRDECGECLHALLDIFPQCCSTNAQWAVFGPSCGIRMDDEKFYQSSGNGGTSRSRKLIISSSVLGSVALLCFSAYCFWYRKRVRKDKMTFDEEKLNGDLPTIPLIAVLHSTNNFSEESILGEGGFGSVYKGILPDGRQIAVKRLSKFSAQGSQEFKNEVMFIAKLQHRNLVRLLGYCLEENEKILVYEYMCNASLDFHLFCDDEKRKQLDWGLRFSIINGIARGILYLHEDSRLKVIHRDLKASNVLLDDEMNPKISDFGLARAFEIGENQAKTKRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVLVLEIICGRKNSGFHRSEHGQSLLLYAWSIWCAGKCLELMDPALIKSFRASEVVKCLHIGLLCVQQDAADRPTMSTVVLMLGSESMALPKPNHPAFSVGKLTSKEASASESSKNRSINDVTVSAAQTQIYLGSNCQNTSQESFSSAYQTNLDKMLTWMSSDAATSKGYNHTSIGINTTVYGLYDCRGDVVGHFCEFCVSFAAREAPKRCPNRVSAMVWYEYCILRYSNESFFGKILTHPTWHGFGTKKVSNMAEVLKGEGFVKSLIRKATEETNQLYYLGGFNLSSTQRRYGMVHCSRDLTNEGCRECLEAVLAQVHKCCEQKIGWFIWSGTCMIRYDDQMFYLLNNQTSSLPASNQQTDKKRGYKRSKILIISISLMGSIFLLCLSLHRFWYRRRVRKDGFRLSSFHKIQTEESWTTDLRIIPLTTILQSTDNFSEACKLGEGGFGSVYKGVLADGTQIAVKRLSKFSGQGSEEFNNEVLFIANLQHRNLVRLLACCLDQNESILVYEYLQNKSLDFHLFGTKEVVLISFSGYMAPEYVMQGLFSVKSDVFSFGVLVLEIMYGRKNSGLYMSEHGQTLLLYAWRTWSAGKCLEMIDPMLEKSFMGSEVERCIHIGLLCVQEDAKDRPTMSDVVVMLASDTMVLPKPKHPAFSIGIMASEEVHTSKSSKIVSNNDLTVSVSLPR* 1721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02539 1720 ProSiteProfiles Gnk2-homologous domain profile. 144 249 IPR002902 -
Phac11g02539 1720 ProSitePatterns Protein kinases ATP-binding region signature. 1477 1499 IPR017441 GO:0005524
Phac11g02539 1720 ProSiteProfiles Protein kinase domain profile. 845 1132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02539 1720 CDD STKc_IRAK 851 1117 - -
Phac11g02539 1720 Gene3D Transferase(Phosphotransferase) domain 1 1542 1678 - -
Phac11g02539 1720 ProSiteProfiles Gnk2-homologous domain profile. 1273 1378 IPR002902 -
Phac11g02539 1720 ProSiteProfiles Gnk2-homologous domain profile. 556 662 IPR002902 -
Phac11g02539 1720 ProSiteProfiles Gnk2-homologous domain profile. 29 138 IPR002902 -
Phac11g02539 1720 FunFam cysteine-rich receptor-like protein kinase 10 921 1124 - -
Phac11g02539 1720 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 285 392 - -
Phac11g02539 1720 FunFam cysteine-rich receptor-like protein kinase 10 1551 1680 - -
Phac11g02539 1720 SUPERFAMILY Protein kinase-like (PK-like) 1452 1693 IPR011009 -
Phac11g02539 1720 ProSiteProfiles Gnk2-homologous domain profile. 668 773 IPR002902 -
Phac11g02539 1720 ProSitePatterns Protein kinases ATP-binding region signature. 851 873 IPR017441 GO:0005524
Phac11g02539 1720 Gene3D - 146 249 IPR038408 -
Phac11g02539 1720 Gene3D - 674 773 IPR038408 -
Phac11g02539 1720 Gene3D - 31 138 IPR038408 -
Phac11g02539 1720 Gene3D - 1282 1378 IPR038408 -
Phac11g02539 1720 Gene3D - 1162 1267 IPR038408 -
Phac11g02539 1720 Gene3D - 557 662 IPR038408 -
Phac11g02539 1720 SUPERFAMILY Protein kinase-like (PK-like) 831 1117 IPR011009 -
Phac11g02539 1720 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 578 1160 - -
Phac11g02539 1720 Pfam Salt stress response/antifungal 45 136 IPR002902 -
Phac11g02539 1720 Pfam Salt stress response/antifungal 1318 1375 IPR002902 -
Phac11g02539 1720 Pfam Salt stress response/antifungal 569 660 IPR002902 -
Phac11g02539 1720 Pfam Salt stress response/antifungal 1171 1264 IPR002902 -
Phac11g02539 1720 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 810 920 - -
Phac11g02539 1720 ProSitePatterns Serine/Threonine protein kinases active-site signature. 967 979 IPR008271 GO:0004672|GO:0006468
Phac11g02539 1720 ProSiteProfiles Protein kinase domain profile. 1471 1720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02539 1720 Pfam Protein tyrosine and serine/threonine kinase 848 1114 IPR001245 GO:0004672|GO:0006468
Phac11g02539 1720 Pfam Protein tyrosine and serine/threonine kinase 322 401 IPR001245 GO:0004672|GO:0006468
Phac11g02539 1720 Pfam Protein tyrosine and serine/threonine kinase 1570 1672 IPR001245 GO:0004672|GO:0006468
Phac11g02539 1720 Pfam Protein tyrosine and serine/threonine kinase 1475 1556 IPR001245 GO:0004672|GO:0006468
Phac11g02539 1720 Gene3D Phosphorylase Kinase; domain 1 1435 1541 - -
Phac11g02539 1720 Gene3D Phosphorylase Kinase; domain 1 806 920 - -
Phac11g02539 1720 Gene3D Phosphorylase Kinase; domain 1 284 390 - -
Phac11g02539 1720 Gene3D Transferase(Phosphotransferase) domain 1 921 1126 - -
Phac11g02539 1720 Gene3D Transferase(Phosphotransferase) domain 1 391 501 - -
Phac11g02539 1720 SMART serkin_6 845 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02539 1720 FunFam Cysteine-rich receptor-like protein kinase 28 1167 1266 - -
Phac11g02539 1720 SUPERFAMILY Protein kinase-like (PK-like) 303 512 IPR011009 -
Phac11g02539 1720 ProSiteProfiles Protein kinase domain profile. 317 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02539 1720 ProSiteProfiles Gnk2-homologous domain profile. 1165 1267 IPR002902 -
Phac11g02539 1720 FunFam Cysteine-rich receptor-like protein kinase 10 1434 1546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02539 Phac-Chr11 36199129 36218441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02539 400 539 Receptor kinase-like Gene Family AT4G05200 35.762 1.47e-25 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac11g02539 PK_Tyr_Ser-Thr 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02539 - - var:108339138 1018.84