Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02538 ATGAGATCAATATGCTTTGCTTTCTGGTTATTGCTGAATTTCAGATCATTCATTACAAATGCTGAAGAACCAGCAAACCTGGGAAGTAACTGTGAAAACACCACCCAGCAAACTCTCAGCAGTGCATACCAAACCAACCTTGATAAAATGTTCACATGGATACCCTCTGATGCAGCCACAAGCCATGGTTATAACCACACCACCATAGGCACCAATAGCTCTGTGTATGGCCTCTATGATTGTGGTGGTGACTTGGCTGGATTCTTTTGTCAATTTTGTGTTTCCACTGCTGTAAAAGAAGCCCCTCAGCTCTGCTCCAATAGGGTGTCTGCTGTGGTGTGGAATGATTACTGTGTTATAAGGTACTCTAATGAGGACTTTTTTGGGAAAGCTTTGACATACCCAACATGGCATGCTGTTGGAGCAAAAAACATATCCAATATGACAGAGATTCAGATAGGTGAGGCTTTTGTTAGAAGTTTGATCAGAAAAGCAACTAACGAAACCAACCAGTTGTACTATAAGGAAGGGTTCAACTTGAGTGCCACTGAGAGTAGGTATGCAGTGGTGCAATGCACTAGAGATCTCACAAATGAAGGGTGCAGACAGTGTTTGGAGGACATGCTCACTGAAGTTCCCAAATGTTGTGAACAACACATTCCATGGACGGTTTGGTCTGGAAGTTGTTTGATAAGGTATGATGATCATATGTTCTACTTGCTTAACACCCAACCACCTTCAGCTCCTGCGCCCAATGCACAAGATAAACAAGAGGGTAATAACAGGTCAAAAACATTGATCATTACCTTCAGTGTGATTGGGCCAATAGTTGTACTATGTTTCAGCCTATACTGCTTCTGGCACAGGAAAAGGCTGATAAAAGTAGGGCTTCCTCTTCCTTCATTTCGTAAGATTCAATCAGAGGAAATGTGGAACACAGACCTGCCTAGAATACCATTAATCACAATTCTACAGAGTACTGATAACTTTTCAGAAGCATCTAAACTAGGGGAAGGTGGATTTGGCCCCGTTTACAAGGGAACTCTACGTGACGGAAAGCAAATTGCAGTAAAAAGACTTTCAAAATTTTCTGGTCAAGGCTCAGAGGAGTTCAATAATGAAGTAATGTTTATAGCTAAATTGAGGCATCGCAACCTTGTAAGACTTTTGGCATGTTGCTTAGAGGAAAATGAAAAGATACTTGTATACGAGTATTTGCCGAATAAAAGTCTCGACTTTCACCTATTTGATGTCAACAAAAGAAAACAATTCGATTGGAAACTAAGATTAAGCATTATCAATGGAATAGCAAGAGGTATTTTATACCTTCATGAGGATTCTCAACTCAGAGTAATTCATAGAGATCTTAAAGCTAGCAACGTTCTATTAGACCATGACATGAATCCCAAAATATCAGATTTTGGATTGGCAAGGGCATTTGAAGTAGGACAAAACCAGGCAAATACAAAACGAGTAATGGGAACCCTTGGGTACATGGCTCCTGAGTATGCTATGGAAGGACTATTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTGTTCTAGAAATCATTTGTGGGAGAAAGAATGGTGGATTCTACATGTCAGATGGTCAAACTCTTCTTTCATATGCTTGGAGAATGTGGTATGAAGGAAAATGTTTGGAATTGATGGATCCAATGCTGGAAAAATCCTTCATAGGAGATGAAGTAGAGAGGTGCATACAGATTGGTTTGTTGTGTGTTCAAGAAGATGCAAGAGATAGACCAACCATGTCCGATGTTGTTGTAATGCAGGCGAGTGACACATTAGCCATTCCAAAACCCAAGCACTCAGCATTTTCAGTTGGAAGAACAGCCGCAGAGGAAGTCACTACATCAAGAAGTTTTAAGAATGATATAACAAGCTCTATTACTTTACCGAGGTAA 1932 0.4027 MRSICFAFWLLLNFRSFITNAEEPANLGSNCENTTQQTLSSAYQTNLDKMFTWIPSDAATSHGYNHTTIGTNSSVYGLYDCGGDLAGFFCQFCVSTAVKEAPQLCSNRVSAVVWNDYCVIRYSNEDFFGKALTYPTWHAVGAKNISNMTEIQIGEAFVRSLIRKATNETNQLYYKEGFNLSATESRYAVVQCTRDLTNEGCRQCLEDMLTEVPKCCEQHIPWTVWSGSCLIRYDDHMFYLLNTQPPSAPAPNAQDKQEGNNRSKTLIITFSVIGPIVVLCFSLYCFWHRKRLIKVGLPLPSFRKIQSEEMWNTDLPRIPLITILQSTDNFSEASKLGEGGFGPVYKGTLRDGKQIAVKRLSKFSGQGSEEFNNEVMFIAKLRHRNLVRLLACCLEENEKILVYEYLPNKSLDFHLFDVNKRKQFDWKLRLSIINGIARGILYLHEDSQLRVIHRDLKASNVLLDHDMNPKISDFGLARAFEVGQNQANTKRVMGTLGYMAPEYAMEGLFSVKSDVFSFGVLVLEIICGRKNGGFYMSDGQTLLSYAWRMWYEGKCLELMDPMLEKSFIGDEVERCIQIGLLCVQEDARDRPTMSDVVVMQASDTLAIPKPKHSAFSVGRTAAEEVTTSRSFKNDITSSITLPR* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02538 643 ProSiteProfiles Gnk2-homologous domain profile. 25 127 IPR002902 -
Phac11g02538 643 Pfam Salt stress response/antifungal 31 124 IPR002902 -
Phac11g02538 643 Pfam Salt stress response/antifungal 158 235 IPR002902 -
Phac11g02538 643 Pfam Protein tyrosine and serine/threonine kinase 334 597 IPR001245 GO:0004672|GO:0006468
Phac11g02538 643 Gene3D Phosphorylase Kinase; domain 1 300 405 - -
Phac11g02538 643 ProSiteProfiles Gnk2-homologous domain profile. 133 238 IPR002902 -
Phac11g02538 643 FunFam Cysteine-rich receptor-like protein kinase 28 27 126 - -
Phac11g02538 643 Gene3D - 25 127 IPR038408 -
Phac11g02538 643 Gene3D - 138 238 IPR038408 -
Phac11g02538 643 SUPERFAMILY Protein kinase-like (PK-like) 304 599 IPR011009 -
Phac11g02538 643 ProSiteProfiles Protein kinase domain profile. 330 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02538 643 FunFam cysteine-rich receptor-like protein kinase 10 406 607 - -
Phac11g02538 643 FunFam Cysteine-rich receptor-like protein kinase 10 299 405 - -
Phac11g02538 643 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 630 - -
Phac11g02538 643 CDD STKc_IRAK 336 599 - -
Phac11g02538 643 Gene3D Transferase(Phosphotransferase) domain 1 406 609 - -
Phac11g02538 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Phac11g02538 643 SMART serkin_6 330 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02538 Phac-Chr11 36187821 36190692 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02538 6 643 Receptor kinase-like Gene Family AT4G05200 40.984 4.35e-168 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac11g02538 PK_Tyr_Ser-Thr 8.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02538 - - pvu:PHAVU_011G194300g 1179.47