Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phac11g02537 | ATGAAATTCTATTTTTTCATACACCTTGACATGACAAATAATAAAGCTCTATTGATTTGCAATAGTGGATACATGGCTCCTGAATATGCTATCGAAGGATTGTTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTAGTCCTAGAAATCATTTGCGGGAGAAAGAATAGTGGATTCTTTCTCTCAGAGCATGGTCAGACTCTTCTGTTGTATGCTTGGAGAATATGGTGTGAAGGAAAATGTTTGGAAATGATGGATCCAACGCTGGAAAAATCCTTTGTAGGCAGTGAAGTTGAGAGATGCATACAGATTGGTTTGTTGTGTGTTCAAGAAGATGCAAAAGATAGACCAACCATGTCTGATGTTGTTGTAATGTTGGCGAGTGATGCAATGGCCCTTCCAAAACCCAAGCACCCACCATTTTCAGTTGGAAGAATGATCCCAGAGGAATTCTCTACATCAAAAAGTTCCAAGAATCTTTCCATTAATGATGTAACAACCTCTATTACTCTACCTAGGTAA | 525 | 0.3829 | MKFYFFIHLDMTNNKALLICNSGYMAPEYAIEGLFSVKSDVFSFGVLVLEIICGRKNSGFFLSEHGQTLLLYAWRIWCEGKCLEMMDPTLEKSFVGSEVERCIQIGLLCVQEDAKDRPTMSDVVVMLASDAMALPKPKHPPFSVGRMIPEEFSTSKSSKNLSINDVTTSITLPR* | 175 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phac11g02537 | 174 | SUPERFAMILY | Protein kinase-like (PK-like) | 18 | 160 | IPR011009 | - | |
| Phac11g02537 | 174 | Gene3D | Transferase(Phosphotransferase) domain 1 | 6 | 135 | - | - | |
| Phac11g02537 | 174 | Pfam | Protein tyrosine and serine/threonine kinase | 20 | 126 | IPR001245 | GO:0004672|GO:0006468 | |
| Phac11g02537 | 174 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase B120 | 6 | 132 | - | - | |
| Phac11g02537 | 174 | Pfam | Domain of unknown function (DUF3403) | 129 | 174 | IPR021820 | GO:0004674 | |
| Phac11g02537 | 174 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 23 | 170 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phac11g02537 | Phac-Chr11 | 36181928 | 36184901 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Phac11g02537 | 9 | 174 | Receptor kinase-like Gene Family | AT4G23150 | 47.674 | 1.20e-46 | 159 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | RLK-Pelle_DLSV | Phac11g02537 | PK_Tyr_Ser-Thr | 3.6e-09 | CL0016 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Phac11g02537 | - | - | var:108339138 | 240.736 |