Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02533 ATGCATGCACCATGGTTTCTAACTGTGAGATCAATGTGCTTTGGTTTCTTGTTATGTTTGAGTTTCAGTTGTTTCAGTTATACACAGGCACAAACACCCATTTACCAGGGAAGTTACTGCCAAAACACCACCCAAGAATCTCTCACCACTGCATACCAAACCAATCTTGAGAGAATCCTCTCATGGATGTCCTCAGATGCAGCCACAAGCAAAGGTTATAACTACACCAGCATAGGAACCAACACCACTGTGTATGGCCTCTACAATTGCCGTGGTGATGTGGTTGGATACTTTTGTCAATTCTGTGTCTCTAATGCTGCCAGAGAAGTTCCTCTGCACTGCCCCAATAGGGTGTCTGCTATAGTGTGGTATGATTTCTGCATTCTGAGGTACTCAAATGAGAACTTCTTTGGGAAAATTCTTACATACCCAACATGGCATGCTGTTGGAACAAAAAACATTTCTGACAAGGAAGAGATTAAGAAAGGTGAGGATTTTATGAGAAGCTTGATCAGAAAAGCAACTGTGGAGACCAACAAGTTGTACTACATGGATGGCTTCAATTTGAGTTTCACTCAAGAAAGGTATGGCTTTGTGCAATGCAGTAGAGATCTCACAAATGGTGGGTGCAGAGAGTGTTTGGAGGCCATTTTAGCAGAAGTTCCCAAAATTTATGAGCAAAAATTAGGATGGTCCATTTGGTCTGGAACTTGTATGATAAAGTATGATGACTATATGTTCTACCTTCCTGAAACAGATAAAGATGGAGTCAACAAGAGGTCAAAAATCTTGATCATCAGCTTCTCTGTGATGGGGTCAATAACTCTACTATGTTTGGGTGTATATTTCTTTTGGAACAGAAGAAGAGATGGGATTCGGCTATCATCGTTTCATAAAATTCAAACTGAGGAAACATTGAACACTGACCTGCCTATAATCCCATTAATCACAGTTCTGCAGAGTACTGATAACTTTTCAGAAGCATCTAAATTGGGGGAAGGTGGATTTGGCTCCGTTTACAAGGGAATTCTACCTGATGGAAGACAAATAGCAGTCAAAAGGCTGTCAAAATTTTCTGGTCAAGGCTCAGAGGAGTTCAATAATGAAGTAATGTCTATAGCTAAATTGCAACATCGCAACCTTGTAAGACTCTTTGCATGCTGCTTGGAGGAAAGTGAAAAGATACTTGTATACGAGTATATGCCTAACGCAAGTCTGTACTGTCACCTGTTTGACGATGAGAAAAGAAAACAACTTGATTGGAAACTAAGATTAAGCATTATCAATGGAATAGCAAGAGGTCTTCTATACCTTCATGAGGACTCTCGACTCAGAGTAATTCATAGAGATCTCAAAGCTAGCAATGTTCTATTAGACCATGACATGAATCCCAAAATATCAGATTTTGGATTGGCAAGAGCATTTGAAATTGGACAAAACCAAGGAAATACAAAGCGAGTAATGGGCACATATGGATACATGGCTCCTGAGTACGCTATGCAAGGATTGTTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTAGTTCTAGAAACCATTTGTGGAAGGAAGAACAACGGATTCTATCTGTCAGAACATGGTCAAACTCTTCTTTTATATGCTTGGAGAACATGGTGTGAAAGAAAATGTTTGGAATTGATGGATCCAATGCTGGAAAAATCCTTCAAAGCCAGTGAAGTTGAGAAGTGCATACACATTGCTTTGTTGTGCATTCAAGAAAATGCAACATACAGACCAACCATGTCAGATGTTGTTGTTATGCTAGGGAGTGACAACATGAAGCTTCCAAAACCCAAGCACCCAGCATTTTCAGTTGGAAGAAAGGTGTCAGAGGAAGTACCAAAATCAAAAAGATCCAAGAATCTTTATAGTACTGATGTAACAATCTCTATTACTTTACCGAGGTAA 1932 0.396 MHAPWFLTVRSMCFGFLLCLSFSCFSYTQAQTPIYQGSYCQNTTQESLTTAYQTNLERILSWMSSDAATSKGYNYTSIGTNTTVYGLYNCRGDVVGYFCQFCVSNAAREVPLHCPNRVSAIVWYDFCILRYSNENFFGKILTYPTWHAVGTKNISDKEEIKKGEDFMRSLIRKATVETNKLYYMDGFNLSFTQERYGFVQCSRDLTNGGCRECLEAILAEVPKIYEQKLGWSIWSGTCMIKYDDYMFYLPETDKDGVNKRSKILIISFSVMGSITLLCLGVYFFWNRRRDGIRLSSFHKIQTEETLNTDLPIIPLITVLQSTDNFSEASKLGEGGFGSVYKGILPDGRQIAVKRLSKFSGQGSEEFNNEVMSIAKLQHRNLVRLFACCLEESEKILVYEYMPNASLYCHLFDDEKRKQLDWKLRLSIINGIARGLLYLHEDSRLRVIHRDLKASNVLLDHDMNPKISDFGLARAFEIGQNQGNTKRVMGTYGYMAPEYAMQGLFSVKSDVFSFGVLVLETICGRKNNGFYLSEHGQTLLLYAWRTWCERKCLELMDPMLEKSFKASEVEKCIHIALLCIQENATYRPTMSDVVVMLGSDNMKLPKPKHPAFSVGRKVSEEVPKSKRSKNLYSTDVTISITLPR* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02533 643 ProSiteProfiles Gnk2-homologous domain profile. 34 136 IPR002902 -
Phac11g02533 643 ProSiteProfiles Gnk2-homologous domain profile. 142 247 IPR002902 -
Phac11g02533 643 Gene3D Phosphorylase Kinase; domain 1 290 400 - -
Phac11g02533 643 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 50 639 - -
Phac11g02533 643 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 291 400 - -
Phac11g02533 643 FunFam Cysteine-rich receptor-like protein kinase 10 145 247 - -
Phac11g02533 643 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Phac11g02533 643 Pfam Salt stress response/antifungal 165 245 IPR002902 -
Phac11g02533 643 Pfam Salt stress response/antifungal 40 133 IPR002902 -
Phac11g02533 643 SUPERFAMILY Protein kinase-like (PK-like) 300 596 IPR011009 -
Phac11g02533 643 CDD STKc_IRAK 331 596 - -
Phac11g02533 643 Gene3D Transferase(Phosphotransferase) domain 1 401 607 - -
Phac11g02533 643 Gene3D - 145 247 IPR038408 -
Phac11g02533 643 Gene3D - 34 136 IPR038408 -
Phac11g02533 643 Pfam Protein tyrosine and serine/threonine kinase 329 595 IPR001245 GO:0004672|GO:0006468
Phac11g02533 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Phac11g02533 643 ProSiteProfiles Protein kinase domain profile. 325 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02533 643 FunFam Cysteine-rich receptor-like protein kinase 28 36 135 - -
Phac11g02533 643 FunFam cysteine-rich receptor-like protein kinase 10 401 603 - -
Phac11g02533 643 SMART serkin_6 325 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02533 Phac-Chr11 36137159 36140005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02533 11 643 Receptor kinase-like Gene Family AT4G05200 40.976 1.41e-168 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac11g02533 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02533 - - gmx:100796972 914.064