Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02529 ATGGGAAAAACACTACTGAATGTGAGATCACTATGTTTTTTTGTTGTCATGTTGTTGCTAAGCTTGAAATCACTAGTTACCAAAGCACAACCACCCTTTTATTTGGGAGATGACTGTGATTTGACCCCCCAAAAGCCTCTCAGCAATGCATACAAAACCAACATTAACAACATCCTCTCATGGCTATCCTCAGATGCAGCCACAAGCAAAGGCTATAACTACAAAACCATAGGCAACAACACCCCTGTCTATGCCCTCTATGACTGCCGTGGTGATGTGGTTGGCTACTTCTGCCAATTCTGTGTCTCCTCTGCTTCAAGAACACTCCTTCAGCACTGCCCTAATAGGTTCTCTGCTGTCATGTACTACAACTTCTGCATTCTGAGGTACTCTAATGAGAACTTCATTGGGAATATTACAATAAACCATCCAAGGCATCATGTTGGGAACAAAAGTGTGTCTGGTGTAGAAGAGATTCAAAAGGGTGAGGATTTCATGAGAAGTTTGATCAGAAAAGCAACTGTGGAGACCAACCAGTTGTACTACATGGATGGCTTCAATTTGAGCTCCACTCAGAGAAGGTATGGCTTGGTGCAGTGCACCAGAGACCTCACCAGTGAGAAGTGCAGACAGTGCTTGGAGGCCATGCTAGCACAAGTTCCCCAATGTTGTCAACATAACTTGGGGTGGCTCGTAGGAACTGCAAGTTGTCACATAAAGTATGATGATTATATGTTCTACCTTTTCAACAATCAATCATATATTTTGCCCAGTTTAACAGCTAAACAAGGGGATGCAAGTAAGTCAAGAAACTTGATCATTGGATTGAGTGTGGTGGGGTTAGCAGCTCTGTGTTTGAGTGTATATTGCTTATGTTACTGGAATAGAGTTAGAAAAGATGGGCTCATAAATGATACTATTCCTCTATCTGCATATACAAATTTGCCTATAATCCCATTAACCACAATTCTTGAGAGTACTGATAACTTCTCAGAAACATCTAAGTTGGGTGAAGGTGGATTTGGCCCAGTTTACAAGGGAATTCTACCGGATGGAAGAGAAGTTGCAGTGAAAAGGCTCTCAAAAGCTTCTAATCAAGGCTCAGAGGAGTTTAAGAATGAAGTAACATTTATAGCTAAATTGCAACATAGCAACCTTGTAAGACTTGTGGCATGCTGCTTGGAGGAAAATGAAAAGATACTTGTATATGAGTATTTGTCAAATGCAAGTCTTGATTTTCACCTATTTGATGATGAAAAAAGGAAGCAACTTGATTGGAAACTAAGGTCAAGCATTATCAATGGAATAGCAAGAGGTCTTTTATATCTTCATGAAGACTCTAGACTCAAGGTAATCCACAGAGATCTCAAAGCTAGCAATGTTCTGTTAGATGATGAAATGAATCCAAAAATATCAGATTTTGGATTGGCAAGAGCATTTGAAAATGGTCAGAACCAGGCAAATACAAACCGAATAATGGGAACTTATGGCTACATGGCTCCAGAGTATGCCATGGAAGGATTGTTCTCAATGAAATCTGATGTTTTCAGCTTTGGAGTACTTGTTCTTGAAATCATTTGTGGGAAAAAGAACAGTGGATTTTTTCTATCAGAACATGGTCAAAGTCTTCTTTTATATGTGAGTTTTCTCTCTTAA 1656 0.3967 MGKTLLNVRSLCFFVVMLLLSLKSLVTKAQPPFYLGDDCDLTPQKPLSNAYKTNINNILSWLSSDAATSKGYNYKTIGNNTPVYALYDCRGDVVGYFCQFCVSSASRTLLQHCPNRFSAVMYYNFCILRYSNENFIGNITINHPRHHVGNKSVSGVEEIQKGEDFMRSLIRKATVETNQLYYMDGFNLSSTQRRYGLVQCTRDLTSEKCRQCLEAMLAQVPQCCQHNLGWLVGTASCHIKYDDYMFYLFNNQSYILPSLTAKQGDASKSRNLIIGLSVVGLAALCLSVYCLCYWNRVRKDGLINDTIPLSAYTNLPIIPLTTILESTDNFSETSKLGEGGFGPVYKGILPDGREVAVKRLSKASNQGSEEFKNEVTFIAKLQHSNLVRLVACCLEENEKILVYEYLSNASLDFHLFDDEKRKQLDWKLRSSIINGIARGLLYLHEDSRLKVIHRDLKASNVLLDDEMNPKISDFGLARAFENGQNQANTNRIMGTYGYMAPEYAMEGLFSMKSDVFSFGVLVLEIICGKKNSGFFLSEHGQSLLLYVSFLS* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02529 551 ProSiteProfiles Gnk2-homologous domain profile. 139 246 IPR002902 -
Phac11g02529 551 ProSiteProfiles Gnk2-homologous domain profile. 32 135 IPR002902 -
Phac11g02529 551 ProSiteProfiles Protein kinase domain profile. 330 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02529 551 FunFam Cysteine-rich receptor-like protein kinase 10 145 246 - -
Phac11g02529 551 Gene3D - 39 135 IPR038408 -
Phac11g02529 551 Gene3D - 152 246 IPR038408 -
Phac11g02529 551 SMART serkin_6 330 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02529 551 Gene3D Phosphorylase Kinase; domain 1 302 405 - -
Phac11g02529 551 FunFam Lectin-domain containing receptor kinase A4.3 406 549 - -
Phac11g02529 551 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 302 405 - -
Phac11g02529 551 Pfam Protein tyrosine and serine/threonine kinase 333 529 IPR001245 GO:0004672|GO:0006468
Phac11g02529 551 Gene3D Transferase(Phosphotransferase) domain 1 406 548 - -
Phac11g02529 551 FunFam Cysteine-rich receptor-like protein kinase 28 35 134 - -
Phac11g02529 551 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 48 547 - -
Phac11g02529 551 Pfam Salt stress response/antifungal 47 132 IPR002902 -
Phac11g02529 551 Pfam Salt stress response/antifungal 164 244 IPR002902 -
Phac11g02529 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Phac11g02529 551 SUPERFAMILY Protein kinase-like (PK-like) 305 531 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02529 Phac-Chr11 36128503 36131653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02529 10 547 Receptor kinase-like Gene Family AT4G05200 41.637 1.95e-137 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac11g02529 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02529 - - vum:124821055 1021.92