Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02523 ATGGACATCAATGTTGTGGTTGATGATGCAGAACAAAAGCAGTTCAGTAACTCATTGGTCAAAGAATGGCTTGATGAGATTAGAGACGCGTTGTATGATGCAGAGGATCTCTTGGATGAAATAGACTATGAATGCTCCAAAAACCAGTCGGTAGCTGAATTCCAGTGCAGTGCTAGCAAGGTAAGCAGTTTTGAATCCAAGATGATAGAAGTCCTGGATGATCTAGAATCTCTCTCAAACCAAAAGGTTGTTCAAGATTTCAAAATTTCTAGTGGTGTTGGATATGGGTTGGGTAATAAAGTGTCAAAGAAAAAAAATGAATCTTCATCATTGGTGGCTGAAGAGGTTATTTATGGCAGAGATGAGGAGAAAGATATGATCCTTAATTGGCTGACATCTGATAGTAAAAATCATAACCAACTGTCTATACTTTCTATTGTGAGTATGGGTGGGATTGGTAAGACCACACTTGCTCAACATGTATACAATGACCCAAAGATGAAGGAAGCTAAATTTGACCTTAAAGCTTGGGTCTGTGTTTCAGATGAGTTTCATGTTTTGACCGTATCAAAAGCAATTATTGGGGCTTTCACTAAATCAAAAGATGATAGTGAAGACCTAGAAATGGCTCACGGAAAACTGAAAGAAAAATTGACTGGAGTGAAGTTTCTTCTGGTTCTGGATGATGTTTGGAATGAAGATCTAAACCAGTGGAAAGCTTTGCAAACTCCTCTTAAATATGGGGCTAAGGGAAGTAAAATTCTTGTGACAACACAGAGTAACAAAGTTGCTTCTACCTTGGAGTCAAACAACATACACCAACTAAAGCAATTACAAGAAGATCACAGTTGGCAAGTTTTTCTAAATCATGCTTTGCAAGATGATAACTCTAAGTTGAATTTTGAGTTGAAGGAGATTGGCATGAAGATAGTTGAAAAGTGTCAAGGACTGCCTCTCGCCCTTGAAACGTCTCCAGAAGAAGTAGGTGAACAATACTTCAATGATCTATTATCAAGGTCATTCTTTCAGCAGTCAATTAGGTTGGGAGTTGATAAAGCAGAAGGAGAAAGAGTACCGAAAACAACCCGTCACTTTTCAATTGTAAGGAATCTTGCTGAATGTGATGAGTATAGGAGTTTATGTGATGCTAAAGGGCTACGAACATTTATAAATTTTGTTGACTATATGGGATGCGATCTTATACATCTCCGTTCATTAGACCTTTCAAGCACAGAAATAGAGAGACTTCCCGATTCAATATGTTCACTCTATAACTTACAAGTGTTGAAGCTCAACCATTGTACCTCTTTGAAGGAGCTGCCCTCGACTTTGCATGAGCTCACCAAGTTGCGCCGCCTTGAACTTCATGGAACTACTTTAAGAAAAGTTCCAGTGCTTCTAGGAAAATTGAAGAATCTTCAAGTATGGATGGGTGAGTTTAAGGTTGGAAAAAGTGGTAGTGAGTTCAGTATTCAACAACTAGGACAACTTGATCTTCATGGATATTTGTCACTTTCAAATCTTGAAAATATTGTGAACCCCTGTGATACGTTGGCAGCGGATTTGAAGAATAAAACACATCTTGTGGGGCTAGGTTTAAATTGGGATTTGAAGCTGAACAATGAGGATTCAACTAAAGAAAGAGAAGTAATAGAGAATTTGAAACCTTCCAGACATTTGAAGCAGTTTTCAATCCGTTATTTTTGTGGCACACAATTTCCAGGTTGGTTATCTGATAAATTTCTATTGAATATCGTGTCCTTAAAGTTGTATAACTGCAAATATTGCCAATGGTTGCCTTCCCTTGGACTTCTAACATTTCTCAAGCAGTTGGAAATTGAAGGCCTTGATAAGATAGTGATGATAGATGCTGATTTTTACGGGAATAGCTCTTCTGCATTTGCATCCTTGGAAACGTTGACCTTTCATGACATGAAAGAATGGGAAGAATGGCAATGCATGACGGGTGCTTTTCCAAGTCTTCAATGTCTTATTGTGACGAAATGTCCCAAACTGAAAGGGCACTTGCCAGAGCACCTTCCTCATTTAAAGAATCTAATTGTTGGGCGGTGCGAACAACTTAGGACTTCGACTCCCAGGACTATAGATATTGGGCACCTCCTATCTCATACTCCTCTTGAATACTTGGCTATTTTTTGTTGTCCGAGCATGAATATTCCTATAAACCATTGCTACTATTTCCTTGTACAATTGAATATCAATCAATGTTGTGACTCTCTGACGAATTTCCCTCTAGACTTGTTTCCAAAACTCTTCTACCTCGGTTTATACATGTGTCGTAACTTACAGTTGATATCGCAGGGGCACCCTCATAACCATTTGAAGAGTCTGAGAATAGAAAAATGCTTTGAATTTGAATCATTTCCCAATGAAGGATTATTTGCATCTTAG 2412 0.3835 MDINVVVDDAEQKQFSNSLVKEWLDEIRDALYDAEDLLDEIDYECSKNQSVAEFQCSASKVSSFESKMIEVLDDLESLSNQKVVQDFKISSGVGYGLGNKVSKKKNESSSLVAEEVIYGRDEEKDMILNWLTSDSKNHNQLSILSIVSMGGIGKTTLAQHVYNDPKMKEAKFDLKAWVCVSDEFHVLTVSKAIIGAFTKSKDDSEDLEMAHGKLKEKLTGVKFLLVLDDVWNEDLNQWKALQTPLKYGAKGSKILVTTQSNKVASTLESNNIHQLKQLQEDHSWQVFLNHALQDDNSKLNFELKEIGMKIVEKCQGLPLALETSPEEVGEQYFNDLLSRSFFQQSIRLGVDKAEGERVPKTTRHFSIVRNLAECDEYRSLCDAKGLRTFINFVDYMGCDLIHLRSLDLSSTEIERLPDSICSLYNLQVLKLNHCTSLKELPSTLHELTKLRRLELHGTTLRKVPVLLGKLKNLQVWMGEFKVGKSGSEFSIQQLGQLDLHGYLSLSNLENIVNPCDTLAADLKNKTHLVGLGLNWDLKLNNEDSTKEREVIENLKPSRHLKQFSIRYFCGTQFPGWLSDKFLLNIVSLKLYNCKYCQWLPSLGLLTFLKQLEIEGLDKIVMIDADFYGNSSSAFASLETLTFHDMKEWEEWQCMTGAFPSLQCLIVTKCPKLKGHLPEHLPHLKNLIVGRCEQLRTSTPRTIDIGHLLSHTPLEYLAIFCCPSMNIPINHCYYFLVQLNINQCCDSLTNFPLDLFPKLFYLGLYMCRNLQLISQGHPHNHLKSLRIEKCFEFESFPNEGLFAS* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02523 803 PANTHER DISEASE RESISTANCE PROTEIN RP 326 789 IPR044974 GO:0006952
Phac11g02523 803 SUPERFAMILY L domain-like 369 797 - -
Phac11g02523 803 SMART LRR_typ_2 400 423 IPR003591 -
Phac11g02523 803 SMART LRR_typ_2 447 470 IPR003591 -
Phac11g02523 803 Pfam NB-ARC domain 121 322 IPR002182 GO:0043531
Phac11g02523 803 Pfam Rx N-terminal domain 3 56 IPR041118 -
Phac11g02523 803 Gene3D - 1 80 - -
Phac11g02523 803 PRINTS Disease resistance protein signature 217 231 - -
Phac11g02523 803 PRINTS Disease resistance protein signature 314 328 - -
Phac11g02523 803 PRINTS Disease resistance protein signature 421 437 - -
Phac11g02523 803 PRINTS Disease resistance protein signature 143 158 - -
Phac11g02523 803 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 323 IPR027417 -
Phac11g02523 803 Gene3D - 93 277 IPR027417 -
Phac11g02523 803 FunFam Probable disease resistance protein At1g61300 100 271 - -
Phac11g02523 803 Gene3D - 278 326 IPR042197 -
Phac11g02523 803 Gene3D Ribonuclease Inhibitor 348 728 IPR032675 -
Phac11g02523 803 Pfam Leucine rich repeat 402 459 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02523 Phac-Chr11 36095665 36098769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02523 144 321 WRKY Transcription Factor Family AT5G45050 26.374 2.26e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02523 - - pvu:PHAVU_011G193600g 979.548