Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02511 ATGAGACGAGTGAGTAATGAAATTGAAGATGAGGTGCTTCCTAGTGATCTGAGTGCGGCACAGTTGAACGATGAGAGTTACGAAGGAAGTACCAGTATTGTTCTGAAGAAAGGTCCGTGGACATCAACCGAAGATGATATTTTGGTGGATTATGTTAACAAGCATGGGGAAGGGAATTGGAATGCTGTTCAGAAGCACACAGGGTTACTACGTTGCGGAAAAAGTTGTCGGCTGAGATGGGCTAATCACCTAAGGCCAAATTTAAAGAAAGGGGCGTTTACTGCAGAAGAGGAGCGGTTCATTGCTGAACTTCATGCCAAAATGGGAAACAAATGGGCACGCATGGCAGCACATTTGCCTGGTCGCACGGATAACGAGATAAAGAATTATTGGAACACCCGGATCAAGAGGCGTCAACGGGCTGGGTTGCCACTTTATCCTCCTGAAGTGTGTTTGCAAGGTTTTCAAGAGAGTCAGCGTAACCAAAGTAATGGTGGACTTAATGGTGGCGATAAAATGCATCTTGATTTATTGCAGACAAATAGTTATGAGATACATGGTGCTATATTTGACAGTCTGAAGGATAATCAGGCAATCTTACCATATACACCAAAGTTTCCCGATGCTTCTGTTTATGGCAATATGCTAAAAGGTCTTGATTCTTCTCAATATTGTAGTGTTATGACACCAGCATCACCTAAGCACAAGCGTCTTAGAGAGTCAACAATACCGTTTATTGGTTCCAATGATACGAGAAAAAACGGTTTATATCCATTTTCTCAAATTCGGGACAATAATTCTGATAAGATTGCACAATCATTTGGAATGCAAGCACTTCTTGATCCTGGTCCCTCATCACACAACTCAATGTGTTACAGCCATTCACTTTCAAATGGCAATTCCTCTACTTCTAAGCCAACTTTTGAGGCTGTGAAGTTGGAGCTCCCTTCACTCCAATATCCAGAACTTGATTTAGGTAGCTGGGGTACATCTCCCCCACCTCCTTTGCTGGAGTCAGTTGATGATTTCTTTCAGTCTCCTACACCAATTAGTACACTCGAGTCAGATTGTTCTTCTCCACAAAATAGTGGCCTGCTGGATGCCTTACTTTATCAGGCAAAGACTCTGAGCAGTTCAAAGAACCATTGTTCTGACAAAAGTTCAAATTCTTCTACTGCAACCCCTGGTGACAGAGGCGACAGCTCTGCTTTGAATGTGTACGAGACAGAATGGGAAGATTATGCTGACCCTGTATCTCCCTTTGGTGCGACTTCAATATTGAATGAGTGCCCTGCTCTTAGAGCCAGTGAGAATTCATTGGACGAACAGCTATCCTTCCAAACATTTACAGGCAACATTCCAAAATTAGAGTTTGTTGATCAGGTTTGGACTCCTGAAAGTGAAAATCAAACCTTGTCCCTCTTGAACTTCACTCGTCCAGACTTCTTGTTTGCTTCAGATTGGCATGACTTAGGTTCTGGGGATGGCAAGAACCCAGCCATCACAACTGATACAACAATGGCCCTTCTGGGAGACCATTTTGCCTCTGACCGTAAGCATATGATTTCTGGAACTTCTCAGTCAAGTCAGGGGTGGGGTTTTGGTTCTTGTGCTACGGCAAATACTATGCCTGCTCTGTGTCAGCTATCCGATCTTGGTTAA 1662 0.4344 MRRVSNEIEDEVLPSDLSAAQLNDESYEGSTSIVLKKGPWTSTEDDILVDYVNKHGEGNWNAVQKHTGLLRCGKSCRLRWANHLRPNLKKGAFTAEEERFIAELHAKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVCLQGFQESQRNQSNGGLNGGDKMHLDLLQTNSYEIHGAIFDSLKDNQAILPYTPKFPDASVYGNMLKGLDSSQYCSVMTPASPKHKRLRESTIPFIGSNDTRKNGLYPFSQIRDNNSDKIAQSFGMQALLDPGPSSHNSMCYSHSLSNGNSSTSKPTFEAVKLELPSLQYPELDLGSWGTSPPPPLLESVDDFFQSPTPISTLESDCSSPQNSGLLDALLYQAKTLSSSKNHCSDKSSNSSTATPGDRGDSSALNVYETEWEDYADPVSPFGATSILNECPALRASENSLDEQLSFQTFTGNIPKLEFVDQVWTPESENQTLSLLNFTRPDFLFASDWHDLGSGDGKNPAITTDTTMALLGDHFASDRKHMISGTSQSSQGWGFGSCATANTMPALCQLSDLG* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02511 553 ProSiteProfiles Myb-like domain profile. 32 84 IPR001005 -
Phac11g02511 553 FunFam Transcription factor GAMYB 92 138 - -
Phac11g02511 553 SUPERFAMILY Homeodomain-like 36 131 IPR009057 -
Phac11g02511 553 CDD SANT 39 84 IPR001005 -
Phac11g02511 553 ProSiteProfiles Myb-like domain profile. 85 135 IPR001005 -
Phac11g02511 553 CDD SANT 92 133 IPR001005 -
Phac11g02511 553 MobiDBLite consensus disorder prediction 379 402 - -
Phac11g02511 553 SMART sant 89 137 IPR001005 -
Phac11g02511 553 SMART sant 36 86 IPR001005 -
Phac11g02511 553 MobiDBLite consensus disorder prediction 379 399 - -
Phac11g02511 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 84 IPR017930 -
Phac11g02511 553 Gene3D - 36 89 - -
Phac11g02511 553 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 23 498 - -
Phac11g02511 553 Pfam Myb-like DNA-binding domain 37 84 IPR001005 -
Phac11g02511 553 Pfam Myb-like DNA-binding domain 90 133 IPR001005 -
Phac11g02511 553 Gene3D - 92 138 - -
Phac11g02511 553 FunFam MYB-related transcription factor 36 89 - -
Phac11g02511 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 139 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02511 Phac-Chr11 35964335 35969360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02511 34 552 MYB Transcription Factor Family AT5G06100 43.289 4.16e-123 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac11g02511 Myb_DNA-binding 1.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02511 K09422 - gmx:100810415 876.7