Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02501 ATGGAAGAAGGGTTGTGCCAAAACTCAGTTCCTGTTTCTGGTTTGGTTGATAGAAGTAGGATTGTAGAGGTTAAACCCCTGCGTAGTTTGGCACCTGTGTTGCCAAAATCTCTTCAACTTTCTACCTCTGGACGGTACCCATCTGGGTTTCCTCCATTTGTTCTGTTTGAGGGACCCGAAGAGTCTCAGCCATCACCAACTCATATGCCAACTCCAATAAGGTCCTACAGGAAGCCACTAGATGGTGCAGAAGAAACCCCTGCTGGAGTCAATGGAGACACTTCTTCACCTATGGAGGATGTCAATGGCAAGAGTGTCGATGATAGCCCAAAGCGTCCTCTGCAGCCTATGCAGAACTGCAAATCATCCCAAAAAAGGCGTACAAAAACTCAGGATTCTGGTTCCAGTTCTTCGGTTGGTGATATTAGCATAGCCCAAAGGGATGATGGTGATCGGGAAGTGGTTAGTCTTGTGCTCATGACTTTTGATTCTCTTCGGAGAAGGCTCTGCCAACTTGAAGAGTCCAAGGAGTTGAACACAATATTGGGAGCCAAGCGCCCGGATTTAAGAGCAAGCAATGTGATGACTAGCAAAGCGTTTCGCACGAACATGAGGAGGAGAGTAGGAGCAGTGCCTGGGGTTGAGGTTGGGGATATTTTCTTTTTGCGGATGGAAATGTGTCATGTGGGTTTACATGGCCAGTCAATGAGTGGAATTGACTACATGAATGCCAAGGATGAGCTTCAGGAGGAACCGGTGGCTTTAAGCATTGTCTCTTCTGGAGTGTATGATAATGATGCAGAGGATGAAGATGTTTTGATTTATACTGGTCAGGGTGAGAACTTCAACAAGAAAGACAAGCATGTGGTTGATCAGAAGCTTCATAGGGGTAATCTTGCTTTAGATAGAAGTTCCTACCGAAAGAATGAAGTAAGAGTCATCCGGGGCTTGAGAGATGCTGGGAATAAAAATGCAAAAGTCTATGTCTATGATGGTCTGTATAAAATCCAAGATTCTTGGATAGAAAAAGGGAAGTCTGGTGGTGGTGTATTCAAGTACAAGTTTGTTAGATTGCCTGGTCAACCTAGTGCTTTTGCTATTTGGAAATCAGTTCAGAAGTGGAAGACAGGCTCATCTTCAAGGACTGGCCTTATTCTAGCTGACCTCTCCACAGGAGTTGAGAGTATTCCTGTATCACTTGTCAATGATGTTGATAACGAGAAGGGGCCTTCTTTTTTCACCTATTCCAACTCTCTCAGAGATTCAAAACCATTCAGTTTAGTGCAATCTTCATATGGCTGCAACTGTAACAAAACATGTGTCCCTGGAGATTTGAGCTGCTCTTGCATCCAAAGAAATGAAGGTGACTTTCCGTATATTGCAAATGGTTTTCTAGTGAGTCGTAAACCATTGGTTCATGAGTGTGGCCCAATGTGTAAGTGCTTTCCTAACTGCAAGAATCGAGTATCGCAGGCAGGTTTGAAGCACCAAATGGAAGTTTTCAAAACCGAAAATAGAGGCTGGGGACTTCGATCATTTGATCCTATACGTGCTGGTACTTTTATTTGTGAGTATGCAGGAGAAGTAATTGATAGAGCCAATGTATATAAGAAAGGGGGATATAATGATGATTATGTTTTTGATACAAGTCGTATTTACAATCCATTCAAATGGAATTATGAGCCTAGCTTATTGGAGGAAATAAGCTCAAATGTCTCTACTGAGGATTATACTATACCGTCTCCTCTAATTATCAGTTCTAAAAATTTTGGAAATGTGGCTAGATACATGAATCATAGTTGCTCCCCAAATGTTTTCTGGCAGCCAGTCTTGTATGCAGAAAATAATCAATACTTTCTTCACATTGTATTTTTTGCCCTTGGACACATTCCTCCAATGACAGAGTTAACATATGATTATGGTTGTTCTGGTCATGGTGATGGTAGTAGTGTACCCCAAGGGATAAAGAAATGCCTGTGTGGATCGTCAAAATGCCGTGGTTCTTTTGGTTGA 2013 0.4247 MEEGLCQNSVPVSGLVDRSRIVEVKPLRSLAPVLPKSLQLSTSGRYPSGFPPFVLFEGPEESQPSPTHMPTPIRSYRKPLDGAEETPAGVNGDTSSPMEDVNGKSVDDSPKRPLQPMQNCKSSQKRRTKTQDSGSSSSVGDISIAQRDDGDREVVSLVLMTFDSLRRRLCQLEESKELNTILGAKRPDLRASNVMTSKAFRTNMRRRVGAVPGVEVGDIFFLRMEMCHVGLHGQSMSGIDYMNAKDELQEEPVALSIVSSGVYDNDAEDEDVLIYTGQGENFNKKDKHVVDQKLHRGNLALDRSSYRKNEVRVIRGLRDAGNKNAKVYVYDGLYKIQDSWIEKGKSGGGVFKYKFVRLPGQPSAFAIWKSVQKWKTGSSSRTGLILADLSTGVESIPVSLVNDVDNEKGPSFFTYSNSLRDSKPFSLVQSSYGCNCNKTCVPGDLSCSCIQRNEGDFPYIANGFLVSRKPLVHECGPMCKCFPNCKNRVSQAGLKHQMEVFKTENRGWGLRSFDPIRAGTFICEYAGEVIDRANVYKKGGYNDDYVFDTSRIYNPFKWNYEPSLLEEISSNVSTEDYTIPSPLIISSKNFGNVARYMNHSCSPNVFWQPVLYAENNQYFLHIVFFALGHIPPMTELTYDYGCSGHGDGSSVPQGIKKCLCGSSKCRGSFG* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02501 670 SMART set_7 496 647 IPR001214 GO:0005515
Phac11g02501 670 SMART preset_2 386 480 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phac11g02501 670 Pfam SET domain 507 641 IPR001214 GO:0005515
Phac11g02501 670 Pfam Pre-SET motif 390 488 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phac11g02501 670 SUPERFAMILY SET domain 395 667 IPR046341 -
Phac11g02501 670 Gene3D SET domain 379 669 IPR046341 -
Phac11g02501 670 Gene3D - 191 378 IPR036987 -
Phac11g02501 670 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 22 670 IPR025794 GO:0016571
Phac11g02501 670 SUPERFAMILY PUA domain-like 191 379 IPR015947 -
Phac11g02501 670 ProSiteProfiles YDG domain profile. 209 357 IPR003105 -
Phac11g02501 670 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 191 376 - -
Phac11g02501 670 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 95 664 - -
Phac11g02501 670 SMART G9a_1 204 361 IPR003105 -
Phac11g02501 670 MobiDBLite consensus disorder prediction 52 145 - -
Phac11g02501 670 MobiDBLite consensus disorder prediction 115 143 - -
Phac11g02501 670 ProSiteProfiles Post-SET domain profile. 654 670 IPR003616 -
Phac11g02501 670 ProSiteProfiles SET domain profile. 496 641 IPR001214 GO:0005515
Phac11g02501 670 ProSiteProfiles Pre-SET domain profile. 432 493 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phac11g02501 670 Pfam SAD/SRA domain 208 361 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02501 Phac-Chr11 35903757 35909623 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02501 62 670 Su(var)3-9 homologs AT5G04940 54.886 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac11g02501 SAD_SRA 3.9e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02501 K24405 - gmx:100800651 1142.49