Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02480 ATGTATATATATATACACGCACTTTCACGAACCTGTTACTATTATCATCACAAACCAAATCAGCAGAAAGTAGCTAGAGCATTAACCATGTCTTCCTTCAAATCTTACGGCAAAGTTGATGAATCAGAGCAAGCCATGCTCGAAGTTCGAAGCAAAAGCCGAAAGAGAATCACCATCATAGCCTTGTCCACAATAGTCCTGATTGGAGTTGTGTGTGCTGCAGTGTTTGGAACAGTTGCTCATAACAACAAGAACAGCAACTCAAATGATGCTCCTTCTGTTTCCAGCTCAGTGAAGGCTGTTTGTGATGTGACACTCTACAAGGACGCCTGCTACAGCAGCCTTGGTTCTCTTGCACACTCGGGTCAGGCTCAACCTCAGGACTTGTTCCTGTTGTCTATTAAAGTGGCCTTAGGTGAGGCTTCTAAGGCTCTTGAGTACTTCTCTGAGAAGGGAGGGTTCAGTGGCTTGAATGTTGATAAAAGGACCATGGAAGATTTTAAGAACTGCAAGGATCTTCTGGGTCTTGCGGTTGATCATTTGAATAGCTCTTTGGCTTCTGGGGGGAAGTTTTCCTTGGTTGATGTGTTGGAGGATCTCAGAACTTGGTTGAGTGCTGCAGGCACTTACCAGCAAACTTGCATTGATGGCATTGGAGAGGCAGAAGAATCATTGAAGAGCAGTGTATACAACAATCTGAAAAATTCAACAGAGTTTACCAGTAACAGTCTTGCCATCGTGACATGGCTTGACAAGGCTGCAAGCTCTGTGAAACTAAGGCGCTTGTTAAGTACTTCGCCACACCAAGATGAAGAACCAAAGTGGCTTCATTCTAAAGATCGTAAGATGCTTGAAGCTGATAATTTGAAGAAGAAAGCTAATATTGTTGTAGCAAAAGATGGCAGCGGAAAATTTAAAACAATCACTGCTGCACTCAAAAATGTCCCTGAAAAGAGTGACAAGAGGACTGTGATCTATGTGAAGAAGGGGATTTACAATGAAAATGTGAGGGTGGAGAAGACCAAATGGAATGTCATGATCATTGGTGATGGTATGAACACCACCATTGTATCTGGAAGCCTTAACTTTGTGGATGGCACCCCAACATTTTCATCAGCAACATTTGCTGTGTTTGGGAAGAATTTCATTGCTAGGGACATGGGATTTCGCAACACAGCTGGTCCACAGAAGCACCAGGCAGTGGCACTGATGACCAGTGCTGATCAAGCAGTTTTCTATAGGTGTCAAATTGATGCATTTCAGGACAGTCTCTATGCTCATTCAAACCGCCAATTCTACAGAGAATGCAACATTTATGGCACTGTTGATTTCATTTTTGGTAATTCAGCAGTTGTGCTCCAAAACTGCAACATTTTGCCAAGGGTGCCTATGAAGGGTCAGCAGAACACCATAACAGCACAGGGCAAAACTGACCCCAACATGAACACAGGAATTTCAATTCAAAATTGCAGCATTTCACCCTTTGGGGACTTAAGTTCTGTGCAGACATACCTTGGAAGACCCTGGAAGAACTACTCAACCACAGTGTTTATGCAATCCTCATTGGGGAGTTTGATTAACCCAAATGGATGGTTACCATGGGTAGGGAATTCAGCACCAGATACCATATTTTATGCAGAATTTCAGAATGTTGGACCTGGAGCTTCAACAAAAAATAGGGTGCAGTGGAAGGGTTTGAAAACCATTACACTTAAACAAGCCAGCAAGTTTACTGTCAAATCTTTTATTTCAGGGGAGAAATGGATTCCAGCTTCTGGTGCCACCTTTAAATCTTCCATGTGA 1803 0.4287 MYIYIHALSRTCYYYHHKPNQQKVARALTMSSFKSYGKVDESEQAMLEVRSKSRKRITIIALSTIVLIGVVCAAVFGTVAHNNKNSNSNDAPSVSSSVKAVCDVTLYKDACYSSLGSLAHSGQAQPQDLFLLSIKVALGEASKALEYFSEKGGFSGLNVDKRTMEDFKNCKDLLGLAVDHLNSSLASGGKFSLVDVLEDLRTWLSAAGTYQQTCIDGIGEAEESLKSSVYNNLKNSTEFTSNSLAIVTWLDKAASSVKLRRLLSTSPHQDEEPKWLHSKDRKMLEADNLKKKANIVVAKDGSGKFKTITAALKNVPEKSDKRTVIYVKKGIYNENVRVEKTKWNVMIIGDGMNTTIVSGSLNFVDGTPTFSSATFAVFGKNFIARDMGFRNTAGPQKHQAVALMTSADQAVFYRCQIDAFQDSLYAHSNRQFYRECNIYGTVDFIFGNSAVVLQNCNILPRVPMKGQQNTITAQGKTDPNMNTGISIQNCSISPFGDLSSVQTYLGRPWKNYSTTVFMQSSLGSLINPNGWLPWVGNSAPDTIFYAEFQNVGPGASTKNRVQWKGLKTITLKQASKFTVKSFISGEKWIPASGATFKSSM* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02480 600 ProSitePatterns Pectinesterase signature 1. 319 338 IPR018040 -
Phac11g02480 600 FunFam Pectinesterase 288 600 - -
Phac11g02480 600 NCBIfam pectinesterase inhibitor domain 75 250 IPR006501 GO:0004857
Phac11g02480 600 SMART PMEI_2 93 246 IPR006501 GO:0004857
Phac11g02480 600 FunFam Pectinesterase 94 251 - -
Phac11g02480 600 Gene3D - 289 600 IPR012334 -
Phac11g02480 600 ProSitePatterns Pectinesterase signature 2. 438 447 IPR033131 -
Phac11g02480 600 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 96 250 IPR035513 -
Phac11g02480 600 CDD PMEI-like_3 100 252 - -
Phac11g02480 600 Pfam Pectinesterase 294 585 IPR000070 GO:0030599|GO:0042545
Phac11g02480 600 PANTHER PECTINESTERASE 68 590 - -
Phac11g02480 600 Gene3D Invertase/pectin methylesterase inhibitor family protein 95 252 IPR035513 -
Phac11g02480 600 Pfam Plant invertase/pectin methylesterase inhibitor 97 246 IPR006501 GO:0004857
Phac11g02480 600 SUPERFAMILY Pectin lyase-like 292 596 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02480 Phac-Chr11 35777203 35780533 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02480 36 600 Carbohydrate Esterase AT3G10710 57.193 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02480 - - gmx:100816529 983.786