Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02478 ATGTCATCCTCACCAATGTCCTTTCTCTTCCTCTTTTTCCTCTCCCTCTTTCTTCCATTACTCTTAGCTCAAACTCCATCACCATCTCCAATACATACCCCTTCTCCACAACAATCTCCAACACATGCTCCTTCTCCATCACCATCTCCAACTCATGCTCCTTCTCCATCACCATCTCTAACTCATGCTCCTTCTCCTTCTCCATCACCATCTCCATCTCAGGCTCCTTCTCCTTCTCCATCACCCTCTCCAACTCATGCTCCTTCTCCTTCTCCATCACCCTCTCCAACTCATGCTCCTCCTCCACCTCTTGCACCTACTTCACCCTCTTCAGCATGCAAGGCCACACTATATCCAAAACTGTGCCGTTCCATTCTGTCATCCATTCAATCCTCACCTTCTGATCCTTACAAATTTGGCAAATTCTCAGTCAAACAAAGCCTGAAACAAGCCAAAAGACTGGCAAAAGCCTTCACTGATTTCCTCAAAAAGAAGAAATCTTCTTCTCTGAGCAGTGCAGAGATTGCAGCCCTAGAAGACTGCAGTGAGCTGAGCCTGCTGAGTGTTGGGTACTTGGAGTCAGTTTCAGAAGAGCTGAAATCTGCAGACCCCTCCAACACAGAGTTGGTTGATAAGATTGAAACATATCTCAGTGCTGTGGCCACTAACCAGTACACTTGCTATGATGAGTTGGTGGTGATCAAGAGTAGCATTGTGAATGCTCTTGCTGTGCCTCTCAACAATGTCACACAACTCTACAGTGTGTCACTTGGGTTGGTCACGCAGGCTCTGAAGAAGAATCTCAAGAAGCATAAGACCCGCAAACATGGTCTTCCCACCCAGAATTACAAGGTCAGACAGCCATTGAAAAAGCTCATTAAGCTTCTTCACACAAAGTACAGTTGCACAGCATCATCCAATTGCAGCACTAGAAGTGAAAGGATTCTTAAAGAAACTGAGAGCAAAGGGATTCTACTTAAAGACTTTGTGATTGTGAGCCTTAGTGGCAGTGACAACTTCACCTCCATTGGAGAAGCTATTGCTGCTGCACCAGACAATTTAAGGCCAGAAGATGGGTATTTCCTTATCTATGCAAAAGAAGGATCCTATGAAGAATATGTCACTGTTCCCTTTCAAAAGAAGAATATCTTGCTTATTGGTGATGGTATCAACAAGACTTGCATCACAGGAAACCATAGTGTGGTAGATGGTTGGACCACTTTCAATTCTTCAACCTTTGCCGTCTCTGGAGAAAGATTCGTTGCTGTGGATGTTACATTCAGAAACACTGCTGGCCCTGAGAAGCACCAAGCAGTGGCTCTGAGGAACAATGCAGACCTCTCTACATTCTACCGTTGCAGTTTTGAAGGGTATCAAGACACTCTCTATGTCCACTCTCTCAGGCAGTTCTATAGGGAATGTGACATTTATGGCACTGTGGATTTCATTTTTGGAAATGCTGCAGTGGTGTTCCAGAGCTGTAACATCTATGCCAGAAAACCATTGTCAAACCAGAAGAATGCTGTCACAGCACAAGGCAGAAATGACCCCAATCAAAGCACTGGAATTTCAATACAGAATTGCAGGATTGAGGCTGCACCTGACTTGGCTGCAGACTTGAAATCAACTAAGAATTACTTGGGAAGGCCATGGAAACTGTACTCAAGAACAGTATACATGCAATCATATATTGGAGAACTAATTCAATCTGTTGGATGGTTAGAGTGGAATGGCACAGATGGATTAGACACCCTCTTTTATGGTGAGTTCAATAACTTTGGACCTGGTTCTGATACAAGCAAGAGGGTACAATGGAATGGTTACAATATACTGAGCCCTACACAAGCTTGGAACTTTACTGTGTATAACTTTACCTTGGGGAATACATGGCTTCCAGATACAGATATACCCTACTCTGAAGGACTTTAG 1929 0.4406 MSSSPMSFLFLFFLSLFLPLLLAQTPSPSPIHTPSPQQSPTHAPSPSPSPTHAPSPSPSLTHAPSPSPSPSPSQAPSPSPSPSPTHAPSPSPSPSPTHAPPPPLAPTSPSSACKATLYPKLCRSILSSIQSSPSDPYKFGKFSVKQSLKQAKRLAKAFTDFLKKKKSSSLSSAEIAALEDCSELSLLSVGYLESVSEELKSADPSNTELVDKIETYLSAVATNQYTCYDELVVIKSSIVNALAVPLNNVTQLYSVSLGLVTQALKKNLKKHKTRKHGLPTQNYKVRQPLKKLIKLLHTKYSCTASSNCSTRSERILKETESKGILLKDFVIVSLSGSDNFTSIGEAIAAAPDNLRPEDGYFLIYAKEGSYEEYVTVPFQKKNILLIGDGINKTCITGNHSVVDGWTTFNSSTFAVSGERFVAVDVTFRNTAGPEKHQAVALRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQSCNIYARKPLSNQKNAVTAQGRNDPNQSTGISIQNCRIEAAPDLAADLKSTKNYLGRPWKLYSRTVYMQSYIGELIQSVGWLEWNGTDGLDTLFYGEFNNFGPGSDTSKRVQWNGYNILSPTQAWNFTVYNFTLGNTWLPDTDIPYSEGL* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02478 642 Gene3D Invertase/pectin methylesterase inhibitor family protein 110 263 IPR035513 -
Phac11g02478 642 ProSitePatterns Pectinesterase signature 2. 476 485 IPR033131 -
Phac11g02478 642 NCBIfam pectinesterase inhibitor domain 111 262 IPR006501 GO:0004857
Phac11g02478 642 SUPERFAMILY Pectin lyase-like 327 641 IPR011050 -
Phac11g02478 642 Pfam Pectinesterase 330 627 IPR000070 GO:0030599|GO:0042545
Phac11g02478 642 MobiDBLite consensus disorder prediction 26 111 - -
Phac11g02478 642 PANTHER PECTINESTERASE 110 632 - -
Phac11g02478 642 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 111 262 IPR035513 -
Phac11g02478 642 MobiDBLite consensus disorder prediction 29 108 - -
Phac11g02478 642 CDD PMEI-like_3 112 261 - -
Phac11g02478 642 Pfam Plant invertase/pectin methylesterase inhibitor 110 258 IPR006501 GO:0004857
Phac11g02478 642 FunFam Pectinesterase 325 642 - -
Phac11g02478 642 Gene3D - 325 642 IPR012334 -
Phac11g02478 642 SMART PMEI_2 104 259 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02478 Phac-Chr11 35771397 35776944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02478 112 642 Carbohydrate Esterase AT3G10720 63.433 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02478 K01051 - gmx:100808277 930.243