Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02462 ATGAAGAGGTCTCCAGCATCTTCTTGTTCATCATCTTCTTCCTCTGTTGGGTTTGAAGCTCCCATTTCTCAGCAAGGCAAAAGAAGGCCTAGCTATTCAAGGAGGAACTTGAAGTCACAAAAATGCAAGCAGAATCAAACCACTGCCAGAAGAAGCTCTATCTATAGAGGAGTCACAAGGCATAGGTGGACAGGTAGGTTTGAAGCTCACCTATGGGATAAGAGTTCTTGGAACAACATTCAGAGCAAAAAGGGTAGACAAGTTTATTTGGGAGCATACGATTCTGAGGAAGCTGCAGCCCGTACCTATGATCTTGCAGCCCTGAAGTACTGGGGAAAAGATGCAGTTCTGAATTTTCCGATTGGAAATTATGCAAAGGATATTGAGGAAATGGACAAAGTTTCAAAAGAAGAATATTTAGCTTCTTTGCGGCGCCAAAGCAGTGGTTTTTCTAGAGGCATTTCTAAGTATAGAGGGGTTGCTAGGCATCATCATAATGGGCGTTGGGAAGCACGCATTGGAAGAGTGTGTGGAAACAAGTACCTTTACTTGGGAACATATAAAACTCAAGAGGAGGCAGCTGTTGCATATGATTTAGCAGCAATAGAGTACAGAGGATTGAATGCAGTGACCAATTTTGACATAAGCAACTACATTGACAAAAAGAAAAAGGACCAAACTCATCAAACAGAAACAGTTCCTCCTAACTCCTCAGACTCTGAAGAAGCAGAAGTAGAAGAACAGAAAACTACACCACCCCCTTTTGAAAATCTACACATGCCACCACTGCAGCACCAAGTTCAACACACACCCCTTGTCTATCATAAGGAAGAATCATCATCACTGGTCACTATTATGGACCATGTGCTTGAACAGGATCTGCCATGGAGCTTCATGTATACTGGGGTGTCTCAGTTTCAAGATCCAGACTTTGCCTTCAGCAAAGCTGATGATTTAGTAGGCATGTTTGATGGGTCAGGATTTGAGGAAGACATTGATTTTCTGTTTTGCACAGAGGATGGTGAGAATGAGAGTGGTATCAATATGAGTGGAGTTTTGGATAGTAATGAATGTGGAGACACAAATGGGATTGGTGGAAACATGGTGCATGGGGATAAGAAGCAGAAGGAGATACTATCATTTGCATCTTCTTCTCCATCATCTACAACAACTGCAGATTCTTGTACCTATGCTTAG 1197 0.4227 MKRSPASSCSSSSSSVGFEAPISQQGKRRPSYSRRNLKSQKCKQNQTTARRSSIYRGVTRHRWTGRFEAHLWDKSSWNNIQSKKGRQVYLGAYDSEEAAARTYDLAALKYWGKDAVLNFPIGNYAKDIEEMDKVSKEEYLASLRRQSSGFSRGISKYRGVARHHHNGRWEARIGRVCGNKYLYLGTYKTQEEAAVAYDLAAIEYRGLNAVTNFDISNYIDKKKKDQTHQTETVPPNSSDSEEAEVEEQKTTPPPFENLHMPPLQHQVQHTPLVYHKEESSSLVTIMDHVLEQDLPWSFMYTGVSQFQDPDFAFSKADDLVGMFDGSGFEEDIDFLFCTEDGENESGINMSGVLDSNECGDTNGIGGNMVHGDKKQKEILSFASSSPSSTTTADSCTYA* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02462 398 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 30 268 - -
Phac11g02462 398 FunFam AP2-like ethylene-responsive transcription factor 155 216 - -
Phac11g02462 398 MobiDBLite consensus disorder prediction 37 51 - -
Phac11g02462 398 SMART rav1_2 54 126 IPR001471 GO:0003700|GO:0006355
Phac11g02462 398 SMART rav1_2 156 220 IPR001471 GO:0003700|GO:0006355
Phac11g02462 398 Gene3D AP2/ERF domain 155 216 IPR036955 GO:0003700|GO:0006355
Phac11g02462 398 Gene3D AP2/ERF domain 54 122 IPR036955 GO:0003700|GO:0006355
Phac11g02462 398 CDD AP2 53 121 IPR001471 GO:0003700|GO:0006355
Phac11g02462 398 SUPERFAMILY DNA-binding domain 53 121 IPR016177 GO:0003677
Phac11g02462 398 MobiDBLite consensus disorder prediction 1 51 - -
Phac11g02462 398 Pfam AP2 domain 54 112 IPR001471 GO:0003700|GO:0006355
Phac11g02462 398 Pfam AP2 domain 155 206 IPR001471 GO:0003700|GO:0006355
Phac11g02462 398 ProSiteProfiles AP2/ERF domain profile. 156 214 IPR001471 GO:0003700|GO:0006355
Phac11g02462 398 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
Phac11g02462 398 PRINTS Ethylene responsive element binding protein signature 196 216 IPR001471 GO:0003700|GO:0006355
Phac11g02462 398 FunFam AP2-like ethylene-responsive transcription factor 53 122 - -
Phac11g02462 398 CDD AP2 155 216 IPR001471 GO:0003700|GO:0006355
Phac11g02462 398 ProSiteProfiles AP2/ERF domain profile. 54 120 IPR001471 GO:0003700|GO:0006355
Phac11g02462 398 MobiDBLite consensus disorder prediction 1 30 - -
Phac11g02462 398 MobiDBLite consensus disorder prediction 222 260 - -
Phac11g02462 398 SUPERFAMILY DNA-binding domain 155 216 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02462 Phac-Chr11 35622642 35628051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02462 15 275 AP2-EREBP Transcription Factor Family AT5G57390 53.435 2.16e-86 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Phac11g02462 AP2 1.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02462 - - gmx:100527432 608.601