Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac11g02454 | ATGGGGTATGAAACCAGAATACTCTCAGATGAGTATGAGGTCTCAGAAGTTCTAGGAAGAGGTGGATTTTCTGTTGTCAGAAAAGGCACAAGAAAATCAAGTAGTGACACCAAAAGCCTTGTAGCCATCAAAACCCTGAGAAGGTCAGGCACTGCCTCAAACCCCAGCTACCCTTCTGGGTTTCCAAGACCAAAGGGTGGAGAGAAGAGCACAGCAGCTATGATGGGGTTCCCCTCAGGGAGACAAGTCTCAGTCTCAGATGCCTTGCTCACCAATGAGATTCTTGTGATGAGGAGAATAGTGGAAAACGTTTCACCACACCCTAATGTGATTGACCTTTATGATGTGTATGAGGACTCCAATGGAGTGCACCTTGTGTTGGAGCTGTGTTCTGGTGGGGAATTGTTTGATAGGATTGTAGCACAAGATAGGTACTCAGAGACTGAAGCTGCAGGTGTGGTTCGCCAGATAGCTTCAGGATTAGAGGCTATTCATAGAGCTAACATTGTGCACAGGGACTTGAAGCCTGAGAATTGTCTTTTCTTGGATGTGAGGAGGGACTCCCCTCTTAAGATCATGGACTTTGGATTGAGTTCTGTTGAAGAATTCACTGACCCAGTTGTTGGTTTGTTTGGATCCATTGATTATGTTTCACCAGAGGCTCTTTCTCAAGGGAAGATAACTACCAAGAGTGACATGTGGTCTCTTGGAGTGATTCTATACATCTTACTCTCTGGGTATCCACCTTTCATTGCTCAGTCCAATCGCCAGAAACAACAAATGATAATGAATGGAAATTTCAGTTTCTATGAGAAGACATGGAAGGGCATTACTCAATCAGCAAAGCAGCTAATTTCAGATCTTCTGACTATAGATCCTAGCAGGAGACCTAGTGCTCAAGATCTTCTGAGTCATCCATGGGTGGTAGGTGACAAAGCCAAGGATGATGCAATGGACCCTGAGATTGTCTCTAGATTGCAGAGCTTCAACGCAAGACGCAAATTGCGTGCAGCTGCAATTGCTAGTGTTTGGAGCTCCACAATCTTCCTCAGAACCAAAAAGCTGAAATCCTTGGTGGGAACACATGATCTCACAGCAGAGGAAATTGAAAACCTCAGGATAAATTTTAAGAAAATATGTGTGAATGGAGACAATGCCACTCTATCAGAGTTTGAAGAGGTGCTGAAAGCAATGAATATGCCATCACTGATCCCTCTAGCACCACGAATATTTGACTTGTTTGACAACAACCGTGATGGAACAGTTGACATGAGAGAGATACTTTGTGGCTTTTCCAGCTTCAAAAACTCCAAAGGAGATGATGCTCTCCGTTTGTGCTTCCAGATGTATGACACAGATCGATCAGGGTGCATCACCAAGGAAGAAGTAGCATCCATGCTCAGAGCTTTACCAGAAGAGTGTCTACCAGCTGATATCACTGAACCTGGGAAACTGGATGAGATATTTGACAGAATGGATGCCAACAGTGATGGAAAAGTTACCTTTGATGAATTTAAAGCTGCCATGCAGAGAGATAGCTCTTTGCAAGACCTTCTTCTCTCTTCTCTAAGACCACAATCCTAA | 1584 | 0.44 | MGYETRILSDEYEVSEVLGRGGFSVVRKGTRKSSSDTKSLVAIKTLRRSGTASNPSYPSGFPRPKGGEKSTAAMMGFPSGRQVSVSDALLTNEILVMRRIVENVSPHPNVIDLYDVYEDSNGVHLVLELCSGGELFDRIVAQDRYSETEAAGVVRQIASGLEAIHRANIVHRDLKPENCLFLDVRRDSPLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGKITTKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMNGNFSFYEKTWKGITQSAKQLISDLLTIDPSRRPSAQDLLSHPWVVGDKAKDDAMDPEIVSRLQSFNARRKLRAAAIASVWSSTIFLRTKKLKSLVGTHDLTAEEIENLRINFKKICVNGDNATLSEFEEVLKAMNMPSLIPLAPRIFDLFDNNRDGTVDMREILCGFSSFKNSKGDDALRLCFQMYDTDRSGCITKEEVASMLRALPEECLPADITEPGKLDEIFDRMDANSDGKVTFDEFKAAMQRDSSLQDLLLSSLRPQS* | 528 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac11g02454 | 527 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 480 | 515 | IPR002048 | GO:0005509 | |
Phac11g02454 | 527 | FunFam | Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 isoform A | 3 | 57 | - | - | |
Phac11g02454 | 527 | SMART | serkin_6 | 12 | 308 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Phac11g02454 | 527 | ProSiteProfiles | Protein kinase domain profile. | 12 | 308 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Phac11g02454 | 527 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 438 | 473 | IPR002048 | GO:0005509 | |
Phac11g02454 | 527 | ProSitePatterns | EF-hand calcium-binding domain. | 493 | 505 | IPR018247 | - | |
Phac11g02454 | 527 | Gene3D | - | 352 | 520 | - | - | |
Phac11g02454 | 527 | SUPERFAMILY | EF-hand | 353 | 518 | IPR011992 | - | |
Phac11g02454 | 527 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 169 | 181 | IPR008271 | GO:0004672|GO:0006468 | |
Phac11g02454 | 527 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 402 | 437 | IPR002048 | GO:0005509 | |
Phac11g02454 | 527 | SMART | efh_1 | 406 | 434 | IPR002048 | GO:0005509 | |
Phac11g02454 | 527 | SMART | efh_1 | 484 | 512 | IPR002048 | GO:0005509 | |
Phac11g02454 | 527 | SMART | efh_1 | 442 | 470 | IPR002048 | GO:0005509 | |
Phac11g02454 | 527 | CDD | STKc_CAMK | 12 | 307 | - | - | |
Phac11g02454 | 527 | Pfam | EF-hand domain pair | 441 | 510 | IPR002048 | GO:0005509 | |
Phac11g02454 | 527 | Pfam | Protein kinase domain | 90 | 308 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Phac11g02454 | 527 | ProSitePatterns | EF-hand calcium-binding domain. | 415 | 427 | IPR018247 | - | |
Phac11g02454 | 527 | MobiDBLite | consensus disorder prediction | 49 | 69 | - | - | |
Phac11g02454 | 527 | Gene3D | Phosphorylase Kinase; domain 1 | 6 | 63 | - | - | |
Phac11g02454 | 527 | Pfam | EF hand | 411 | 426 | IPR002048 | GO:0005509 | |
Phac11g02454 | 527 | CDD | EFh | 409 | 468 | IPR002048 | GO:0005509 | |
Phac11g02454 | 527 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 6 | 489 | - | - | |
Phac11g02454 | 527 | FunFam | Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase | 135 | 325 | - | - | |
Phac11g02454 | 527 | ProSitePatterns | EF-hand calcium-binding domain. | 451 | 463 | IPR018247 | - | |
Phac11g02454 | 527 | PRINTS | Recoverin family signature | 410 | 431 | - | - | |
Phac11g02454 | 527 | PRINTS | Recoverin family signature | 434 | 453 | - | - | |
Phac11g02454 | 527 | PRINTS | Recoverin family signature | 364 | 383 | - | - | |
Phac11g02454 | 527 | PRINTS | Recoverin family signature | 500 | 520 | - | - | |
Phac11g02454 | 527 | ProSitePatterns | Protein kinases ATP-binding region signature. | 18 | 44 | IPR017441 | GO:0005524 | |
Phac11g02454 | 527 | FunFam | calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 | 351 | 520 | - | - | |
Phac11g02454 | 527 | CDD | EFh | 443 | 510 | IPR002048 | GO:0005509 | |
Phac11g02454 | 527 | Gene3D | Phosphorylase Kinase; domain 1 | 71 | 135 | - | - | |
Phac11g02454 | 527 | Gene3D | Transferase(Phosphotransferase) domain 1 | 136 | 351 | - | - | |
Phac11g02454 | 527 | FunFam | Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase | 76 | 134 | - | - | |
Phac11g02454 | 527 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 325 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac11g02454 | Phac-Chr11 | 35571878 | 35576531 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac11g02454 | 89 | 513 | EF-hand Containing Proteins | AT3G10660 | 37.300 | 9.96e-79 | 258 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CAMK1-DCAMKL | Phac11g02454 | Pkinase | 1e-55 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac11g02454 | K13412 | - | gmx:732616 | 953.74 |