Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02407 ATGGCAAACTTGGAAGAACTTGATTTGTCCAATAACTTTTTCTCAGGTACAATTCCTTTTACAATTGGAAATTTGAGCAAGTTAGTCTATTTGTACATGTATGGGAACAATCTATCTGGATCTATTCCTAATGAACTGGGAAAACTCCATTTTCTTGTGACGATCCAATTGTTACATAATAATCTTTCTGGGCCAATTTCATCTTCGATCGGTAACTTGGTTAATTTGGAATCTATTCTCCTTCGTGAAAACAAACTCTCTGGAACAATTCCTTCGACTATTTGTCATTTGACAAATCTCACCACACTTGATTTGTCCATTAACTCTTTGTTAGGTACAATCCCCTCTACCATTGGAAATTTGACAAAGCTCACCATACTTGATTTTTCCCTAAACTCTTTGTCAGGTATAATTCCCTCTACAATTGCAATTTTGACAAAGCTCACCATATTTAGTTTATTCTCAAATAAGCTTGGTGGATACATTCCAACAGAAATTAATATGCTAAACAACCTGGAAATTTTGCAATTATCTAACAATAATTTCATTGGTCATTTGCCTCACAACATTTGCTTCAATGGAAAGTTGACATATTTTGGTGTCCACAGAAACTATTTCACAGGTCCATTACCTAAGAGTTTGAAGAATTGCTCCAATCTCATAAGAGTTTTGGTACAGCAAAACAATTTAACAGGAAATCTAACAGAGGATTTGGGTGTATACCCAAACTTGGATTACATAGACCTGAGTGAAAACAACTTTTATGGCCATCTTTCTCCAAATTGGGGAAAATGCCATAATCTCACAAGCCTCAAAATCTCCAACAACAATTTATCAGGTAGCATTCCAACAGAACTAAGTCAAGCAACCAATTTGCATGTACTTCAATTGTCTTCAAATCACCTCACAGGAGATATTCCTGAAGATTTAGGTAATTTGACCTACTTGATCAAACTCTCTCTCAATATGAATAATCTTTCAGGAAATGTTCCTATACAAATAGCATCATTGCAAAATCTTGACACCTTAGAGCTCGGAGCAAATAAATTTTCTGGCTTAATTCCAAATCAACTTGGAAATTTGGTCAATTTATTAAATTTGAATTTGAGCCAAAATAAATTTAGGGAAAATATTCCATCCGAGTTTGGTAAATTAAAATATCTCCAAAGCCTTGATTTGAGCATGAACATTTTGAGTGGAAAAATACCACCAATGTTCGAAGAGTTGAAAAGCTTAGAAACATTAAATCTCTCACACAATCATCTTTTAGGCGATCTTTCCAGCCTTGATGAGATGATAAGCTTGACATCTGTTGATATATCATACAACCAATTACAGGGTCCACTTCCAGACATTTCAGGCTTCCGTATTGCTACCATTGAAACATTGAGAAATAATAAAGGTTTGTGTGGTAATGTCTCAGGCTTGGAACCATGCCCAACATCATGTGACAAATCCCAAAGTCATAAGACTAACAATGTCATATTGGTTCTTTTACCCACTGGTTTGGGCATTTTCATGCTAGCATTATTGGAGTCTCATATCATATTTGTAGAAGAATCATCAAGCCAAAATCTTTTTGCAATATGGAGTTTTGATGGAAAGATGGTGTATGAGAACATAATTGAAGCCACGGAAGAGTTTGACAGTAAACATCTCATTGGAGTTGGAGGACAAGGAAGTGTTTACAAAGCTGAATTGCAAACCAATCAAATTGTTGCTGTTAAGAAATTCCATTCAGTACAAAATGGAGAAATGTCCAATGTTAAAGCTTTCAAAAGTGAAATTCAAGCTTTGACAGAGATTCGACATCGTAACATTGTGAGGCTATATGGGTTTTGTTCTCATTCCCGATTCTCATTTTTGGTGTATGAGTTCTTGGAAAAGGGGAGCATATATAATATTTTAAAAGACGATGAACAGGCAATTGTATTTAATTGGAATAGGAGGATTGATGCCATTAAAGGTGTAGCAAATGCTTTATGCTATATGCATCATGATTGTTCACCCTGTATCGTTCATCGAGATATATCAAGCAAGAATGTTCTTTTGAATTTGGAGTATGTGGCTCATGTCTCAGATTTTGGAACAGCCAAGCTTCTTAATCCTAATTCAACCAATTGGACCTCATTTGTGGGAACTTTTGGATATGCTGCTCCAGAACTTGCATACACGATGGATGTGAATGAAAAATGTGATTTGTACAGCTTTGGGGTATTGGCACTAGAAATACTTTTTGGAGAGCACCCTGGAGATTTTGTAACTTTGTTACTGTCTGCTTCTAATGCCATGGATTCAATACTTAATAGTCCTTCGTTGATGGGTAAGTTAGATCAACGTCTCCCATACGCTACAAATATTGCTAAGGAGATAGCTTTGATTGTAAGGATAGCAAATGCTTGCTTGACTGAAAGTCCTAGTTCTCGTCCTACCATGGAGCAAGTTGTCAACTACTTTTCAGTGTAG 2466 0.3585 MANLEELDLSNNFFSGTIPFTIGNLSKLVYLYMYGNNLSGSIPNELGKLHFLVTIQLLHNNLSGPISSSIGNLVNLESILLRENKLSGTIPSTICHLTNLTTLDLSINSLLGTIPSTIGNLTKLTILDFSLNSLSGIIPSTIAILTKLTIFSLFSNKLGGYIPTEINMLNNLEILQLSNNNFIGHLPHNICFNGKLTYFGVHRNYFTGPLPKSLKNCSNLIRVLVQQNNLTGNLTEDLGVYPNLDYIDLSENNFYGHLSPNWGKCHNLTSLKISNNNLSGSIPTELSQATNLHVLQLSSNHLTGDIPEDLGNLTYLIKLSLNMNNLSGNVPIQIASLQNLDTLELGANKFSGLIPNQLGNLVNLLNLNLSQNKFRENIPSEFGKLKYLQSLDLSMNILSGKIPPMFEELKSLETLNLSHNHLLGDLSSLDEMISLTSVDISYNQLQGPLPDISGFRIATIETLRNNKGLCGNVSGLEPCPTSCDKSQSHKTNNVILVLLPTGLGIFMLALLESHIIFVEESSSQNLFAIWSFDGKMVYENIIEATEEFDSKHLIGVGGQGSVYKAELQTNQIVAVKKFHSVQNGEMSNVKAFKSEIQALTEIRHRNIVRLYGFCSHSRFSFLVYEFLEKGSIYNILKDDEQAIVFNWNRRIDAIKGVANALCYMHHDCSPCIVHRDISSKNVLLNLEYVAHVSDFGTAKLLNPNSTNWTSFVGTFGYAAPELAYTMDVNEKCDLYSFGVLALEILFGEHPGDFVTLLLSASNAMDSILNSPSLMGKLDQRLPYATNIAKEIALIVRIANACLTESPSSRPTMEQVVNYFSV* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02407 821 Gene3D Ribonuclease Inhibitor 143 483 IPR032675 -
Phac11g02407 821 SUPERFAMILY L domain-like 2 255 - -
Phac11g02407 821 SUPERFAMILY L domain-like 224 471 - -
Phac11g02407 821 FunFam Uncharacterized protein 191 489 - -
Phac11g02407 821 FunFam Leucine-rich repeat receptor protein kinase EMS1 92 189 - -
Phac11g02407 821 Gene3D Ribonuclease Inhibitor 1 142 IPR032675 -
Phac11g02407 821 Pfam Leucine Rich Repeat 3 25 IPR001611 GO:0005515
Phac11g02407 821 FunFam Leucine-rich repeat receptor protein kinase EMS1 1 91 - -
Phac11g02407 821 Pfam Leucine rich repeat 98 158 IPR001611 GO:0005515
Phac11g02407 821 Pfam Leucine rich repeat 242 302 IPR001611 GO:0005515
Phac11g02407 821 Pfam Leucine rich repeat 366 422 IPR001611 GO:0005515
Phac11g02407 821 FunFam Leucine-rich repeat receptor protein kinase MSP1 512 626 - -
Phac11g02407 821 ProSitePatterns Tyrosine protein kinases specific active-site signature. 672 684 IPR008266 GO:0004672|GO:0006468
Phac11g02407 821 PANTHER LEUCINE RICH REPEAT KINASE 2 132 819 - -
Phac11g02407 821 Gene3D Transferase(Phosphotransferase) domain 1 627 821 - -
Phac11g02407 821 PRINTS Leucine-rich repeat signature 409 422 - -
Phac11g02407 821 PRINTS Leucine-rich repeat signature 100 113 - -
Phac11g02407 821 ProSiteProfiles Leucine-rich repeat profile. 411 433 IPR001611 GO:0005515
Phac11g02407 821 SMART LRR_typ_2 361 385 IPR003591 -
Phac11g02407 821 SMART LRR_typ_2 290 313 IPR003591 -
Phac11g02407 821 SMART LRR_typ_2 25 49 IPR003591 -
Phac11g02407 821 SMART LRR_typ_2 1 24 IPR003591 -
Phac11g02407 821 SMART LRR_typ_2 409 436 IPR003591 -
Phac11g02407 821 SMART LRR_typ_2 169 193 IPR003591 -
Phac11g02407 821 SMART LRR_typ_2 97 121 IPR003591 -
Phac11g02407 821 SMART LRR_typ_2 337 360 IPR003591 -
Phac11g02407 821 Pfam Protein kinase domain 550 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02407 821 ProSiteProfiles Protein kinase domain profile. 548 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02407 821 FunFam MDIS1-interacting receptor like kinase 2 627 821 - -
Phac11g02407 821 Gene3D Phosphorylase Kinase; domain 1 514 626 - -
Phac11g02407 821 SUPERFAMILY Protein kinase-like (PK-like) 528 818 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02407 Phac-Chr11 35164607 35167403 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02407 1 720 Receptor kinase-like Gene Family AT4G08850 45.609 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac11g02407 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02407 - - gmx:100811066 1122.07