Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02406 ATGGTGTTCTTATGGCTGCTTCTACTTGCAATGGCCAGTTCTGTGCATGCAGCAGTGTCTTCCTCACTCTCATCACTTCAACACACTGAAGCAAACGCTCTGTTGAAGTGGAAAGCAAGCCTTGACAACCCAAGTCAGACATTGCTGTCTTCATGGCATGGCAACAGTTCATGCAACTGGCTTGGAATTTCTTGTGACTACTCAGGATCAGTCTCCAACATTAATCTTACAAACATTGGATTATCTGGTATGCTTCAAACTCTCAATTTTTCAACACTTACCAACATCCTCACTTTAGATATGAGTCATAACTCCTTGAGTGGAAGCATTCCTCCTCGAATTGGAGTGTTATCCAAACTCACTCATCTTGATTTAAGTAAAAATCATCTCACTGGACCAATTCCTTCTGAAATAACTCACTTGGTGAGTCTTCACACTTTATATCTGACAAATAATGTTTTCAATGGTTCTATTCCTGAAGAAATAGATGAGTTAAGGAATTTGAGAGAGATTACCATTCGATCTGCCAATCTCACAGGCACAATCCCAAATTCTATTGGAAAGCTATCATTCTTGTCAAATCTTTATTTGCGGAATTGCAGTCTCACAGGATCTATTCCAAAATCTATTGGAAATTTGACAAAGCTCACTACACTTTCTTTGTCAGTTAACTCTTTGTCAGGTACAATCCCCTCTACAATTGGAAATTTGATAAAGCTCACCACACTTCAATTGTCTACTAACTCTTTCTCAGGCACAATATCCTCTACAATTGGAAATTTGACAAAGCTCACCACACTTCATTTATCGTCAAATAAGCTTGGTGGATACATGCCAATAGAAATGAATATGCTAAAAAACCTAGAAAGTTTGCAATTATATGACAATAATTTCATTGGTCATTTGCCTCACAACATTTGCTCAAGTGGAAAGTTGACAAGATTTAGTGCTAGCAGAAATTATTTCATAGGTCCAATACCTAAGAGTTTGAAGAATTGCTCCAATCTCACAAGAGTTTTGTTACAGAAAAACCATTTAACAGGAAACATAACAGAGGATTTGGGTGTATACCCAAACTTGGATTACATAGACCTGAGTGAAAACAACTTTTATGGTCATCTTTCTCCAAATTGGGGAAAATGCCATAATCTCACAAGCCTCAAAATCTCCAACAACAATTTATCAGGTAGCATTCCAATAGAACTAAGTCAAGCAACCAATTTACATGTACTTCAATTGTCTTCAAATCACCTCACAGGAGACATTCCTGAAGATTTAGCTAATTTGACCTACTTGATCAAACTCTCTCTCGATATGAATAATCTTTCAGGAAATGTTCCTATACAAATAGCATCATTGCAAAGTCTTGACACCTTAGATCTTGGAGCAAATAACTTTTTTGGCTTAATTCCAAATCAACTTGGCAATTTGGTCAATTTATTAAATTTGAATTTGAGCCAAAATAAATTTAGGGAAAATATTCCATCCGAGTTTGGTAAATTAAAATATCTTCGAAGCCTTGATTTGAGCATGAACATTTTGAGTGGAAAAATACCACCAATGTTCGAAGAGTTGAAAAGCTTAGAAACATTAAATCTCTCACACAATCATCTTTTAGGCGATCTTTCCAGCCTTGATGAGATGATAAGCTTGACATCTGTTGATATATCATACAACCAATTACAGGGTCCACTTCCAGACATTTCAGGCTTCCGTATTGCTACCATTGAAGCATTGAGAAATAATAAAGGCTTGTGTGGTAATGTCTCAGGCTTGGAACCATGCCCAACATCATGTGACAAATCCCAAAGTCATAAGACTAACAATGTCATATTGGTTCTTTTACCCACTGGTTTGGGCATTTTCATGCTAGCAGTATTTGTCTTTGGAGTCTCATATCATCTTTGTAGAAGGTCAAAGACAAAAGAACATTTGGATGCAGAATCATCAAGCCAAAATCTTTTTGCGATATGGAGTTTTGATGGAAAGATGGTGTATGAGAACATAATTGAAGCCACGGAAGAGTTTGACAATAAACATCTCCTTGGAGTTGGAGGACAAGGAAGTGTTTACAAAGCTGAATTGCAAAGAAATCAAATTGTTGCTGTTAAGAAATTCCATTCAGTACAAAATGGAGAAATGTCCAATGTTAAAGCTTTCAAAAGTGAAATTCAAGCTTTGACGGAGATTCGACATCGTAACATTGTGAGGCTATATGGGAGGGTTGATGCCATTAAAGGTGTAGCAAATGCTTTATGCTATATGCATCATGATTGTTCACCCCCAATCGTTCATCGAGATATATCAAGTAAGAATGTTCTTTTGAATTTGGAGTATGTGGCTCATGTCTCAGATTTTAGAACATCTAAGCTTCTTAATCCTAATTCAACCAATTGGACCTCATTTGTGGGAACTTTTGGATATGCTGCTCCAGAACTTGCATACACGATGGATGTGAATGAAAAATGTGACGTGTACAGCTTTGGGGTATTGGCACTAGAAATACTTTTTGGAGAGCACCCTGGAGATTTTGTAACTTTGTTACTGTCTACATCCAATGCCATAGATTCAACACTTGATATTCCTTCGTTGATGGGTAAGTTAGATCAACGTCTCCCATATCCTACAAATATTGCTAAGGAGATAGCTTTGATTGTAAGGATAGCAAATGTTTGCTTAACTGAAAGTCCTAGTTCTCGTCCTACCATGGAGCAAGTTGTCAACTACTCTTCAGTGTAG 2739 0.3706 MVFLWLLLLAMASSVHAAVSSSLSSLQHTEANALLKWKASLDNPSQTLLSSWHGNSSCNWLGISCDYSGSVSNINLTNIGLSGMLQTLNFSTLTNILTLDMSHNSLSGSIPPRIGVLSKLTHLDLSKNHLTGPIPSEITHLVSLHTLYLTNNVFNGSIPEEIDELRNLREITIRSANLTGTIPNSIGKLSFLSNLYLRNCSLTGSIPKSIGNLTKLTTLSLSVNSLSGTIPSTIGNLIKLTTLQLSTNSFSGTISSTIGNLTKLTTLHLSSNKLGGYMPIEMNMLKNLESLQLYDNNFIGHLPHNICSSGKLTRFSASRNYFIGPIPKSLKNCSNLTRVLLQKNHLTGNITEDLGVYPNLDYIDLSENNFYGHLSPNWGKCHNLTSLKISNNNLSGSIPIELSQATNLHVLQLSSNHLTGDIPEDLANLTYLIKLSLDMNNLSGNVPIQIASLQSLDTLDLGANNFFGLIPNQLGNLVNLLNLNLSQNKFRENIPSEFGKLKYLRSLDLSMNILSGKIPPMFEELKSLETLNLSHNHLLGDLSSLDEMISLTSVDISYNQLQGPLPDISGFRIATIEALRNNKGLCGNVSGLEPCPTSCDKSQSHKTNNVILVLLPTGLGIFMLAVFVFGVSYHLCRRSKTKEHLDAESSSQNLFAIWSFDGKMVYENIIEATEEFDNKHLLGVGGQGSVYKAELQRNQIVAVKKFHSVQNGEMSNVKAFKSEIQALTEIRHRNIVRLYGRVDAIKGVANALCYMHHDCSPPIVHRDISSKNVLLNLEYVAHVSDFRTSKLLNPNSTNWTSFVGTFGYAAPELAYTMDVNEKCDVYSFGVLALEILFGEHPGDFVTLLLSTSNAIDSTLDIPSLMGKLDQRLPYPTNIAKEIALIVRIANVCLTESPSSRPTMEQVVNYSSV* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02406 912 Pfam Leucine Rich Repeat 119 141 IPR001611 GO:0005515
Phac11g02406 912 Pfam Leucine Rich Repeat 504 525 IPR001611 GO:0005515
Phac11g02406 912 Gene3D Transferase(Phosphotransferase) domain 1 746 911 - -
Phac11g02406 912 SUPERFAMILY RNI-like 73 371 - -
Phac11g02406 912 FunFam Uncharacterized protein 307 605 - -
Phac11g02406 912 SUPERFAMILY L domain-like 332 587 - -
Phac11g02406 912 FunFam Leucine-rich repeat receptor protein kinase MSP1 638 754 - -
Phac11g02406 912 ProSitePatterns Tyrosine protein kinases specific active-site signature. 763 775 IPR008266 GO:0004672|GO:0006468
Phac11g02406 912 PANTHER LEUCINE RICH REPEAT KINASE 2 234 741 - -
Phac11g02406 912 Gene3D Ribonuclease Inhibitor 26 177 IPR032675 -
Phac11g02406 912 SUPERFAMILY Protein kinase-like (PK-like) 657 909 IPR011009 -
Phac11g02406 912 ProSiteProfiles Protein kinase domain profile. 676 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02406 912 Gene3D Ribonuclease Inhibitor 178 279 IPR032675 -
Phac11g02406 912 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Phac11g02406 912 SMART LRR_typ_2 525 552 IPR003591 -
Phac11g02406 912 SMART LRR_typ_2 117 140 IPR003591 -
Phac11g02406 912 SMART LRR_typ_2 285 309 IPR003591 -
Phac11g02406 912 SMART LRR_typ_2 453 476 IPR003591 -
Phac11g02406 912 SMART LRR_typ_2 141 165 IPR003591 -
Phac11g02406 912 SMART LRR_typ_2 477 501 IPR003591 -
Phac11g02406 912 SMART LRR_typ_2 213 237 IPR003591 -
Phac11g02406 912 SMART LRR_typ_2 93 115 IPR003591 -
Phac11g02406 912 SMART LRR_typ_2 261 284 IPR003591 -
Phac11g02406 912 FunFam MDIS1-interacting receptor like kinase 2 isoform A 204 306 - -
Phac11g02406 912 Gene3D Ribonuclease Inhibitor 371 470 IPR032675 -
Phac11g02406 912 Gene3D Ribonuclease Inhibitor 471 596 IPR032675 -
Phac11g02406 912 Gene3D Ribonuclease Inhibitor 280 370 IPR032675 -
Phac11g02406 912 ProSiteProfiles Leucine-rich repeat profile. 527 549 IPR001611 GO:0005515
Phac11g02406 912 ProSiteProfiles Leucine-rich repeat profile. 407 430 IPR001611 GO:0005515
Phac11g02406 912 Gene3D Phosphorylase Kinase; domain 1 663 745 - -
Phac11g02406 912 FunFam Nuclear pore complex protein NUP107 27 184 - -
Phac11g02406 912 Pfam Protein kinase domain 744 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02406 912 Pfam Protein kinase domain 677 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02406 912 PRINTS Leucine-rich repeat signature 120 133 - -
Phac11g02406 912 PRINTS Leucine-rich repeat signature 525 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02406 Phac-Chr11 35147093 35150093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02406 6 811 Receptor kinase-like Gene Family AT4G08850 41.720 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac11g02406 Pkinase 5.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02406 - - gmx:100811066 1101.66