Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02399 ATGAGTCTCTGGGACAGATATGTTACTGCCATTTATTGGTCCATTGTGACTCTTACTACCACTGGCTATGGAGATTTGCATGCTGAAAACCCAAGGGAGATGCTCTTTTTCATCTTCTACATGTTGTTCAACTTGGGATTAACTTCATACATCATTGGAAACATGACAAACATAGTGGTTCATTGGACAAGTCGCACCAGAAATTTTAGGGACACAGTGAGAGCAGCTTCAGAATTTGCATCAAGAAACCATCTGCCACATCACATACAGGAACAGATGTTGTCACACTTGTGTTTGAAGTTCAAGACAGAAGGACTGAAGCAGCAAGAGACACTGAATGGCATGCCAAAGGGAATTCGTGCAAGCATTGCACACCAACTGTTTTTCCCTGTTCTGCAGAGGCTCTACCTCTTCCAAGGAGTTTCAGATGATTTTCTCTTCCAACTGGTTACAGAGATGGAAGCTGAGTATTTCCCACCAAAGGAAGATGTGATACTACAAAATGAGTCTCCCACAGACCTCTACATACTGGTTTCAGGAGCAGTGGATCTCATTCGCTGTGTTGATGGCAATGAACAAGTTCTGAAGAAGGTTAAGGCAGAGGATACATTTGGAGAGATTGGAGTGTTGTACTGTAGACCACAGCCTTTCGCTGTTCGGACCACTGAGCTTTCTCAAATTTTAAGACTCAGCAGAACTTCCTTAATGAACTACTTACATGCATATCCACAAGCTGCACAGATCATAATGAAAAACATCTTCATGAGGTTAAAGGGGCATGAAGGCTTGGATTTTGAATATTCTCCAAGAGACCCCCAAATGCATCAAGAGATGGATAACACAGGAGGAAGTTTTCCTGATTCATCTACAAATAATTCTGATGGGGAAACCAGATTGCATAACTTGGTTCCTGAGGATGGAAAAGGAAATCTTCATGCTAATTTTCACAAAGATCATCCTGAAATGGAAGAAAATGAAAAGAACCAAGGCCCTATAAGATGGAAACAGAAGTCTCTTGTAGATCAGCAACAAAACAAGAGCCTTTCTGAGCTTGCAAATAACCATGAAAATAGGAAGATATTAGATGAACATATCATAGATTTTTTGGAGCCAGAAATCCCTTTCAACTACCCTTTAGGAAAAATATACTCAACCCCTTATTCAAGTACTTCTAGCCACAGAACTCAGAGAGAAACAGAAAGATTCTTCAAAAAGAGAGTCACCATCCACTGTCTAAGCAAACACAAAACTACCTTACAGGAACATGGAAAGTTGATAATCCTACCTGATTCATTAGAAGAGCTGCTCCATATTGCTGGAGAAAAATTTGGAGGCCCCAAGCCTACAAAGGTAATCACCACAGAGAATGCAGAGATAGATGATATTAGTGTGATTCGAGATGAGGATCATCTATTTTTTCTTTGCAGTGACACTGAAAGTTGA 1443 0.4047 MSLWDRYVTAIYWSIVTLTTTGYGDLHAENPREMLFFIFYMLFNLGLTSYIIGNMTNIVVHWTSRTRNFRDTVRAASEFASRNHLPHHIQEQMLSHLCLKFKTEGLKQQETLNGMPKGIRASIAHQLFFPVLQRLYLFQGVSDDFLFQLVTEMEAEYFPPKEDVILQNESPTDLYILVSGAVDLIRCVDGNEQVLKKVKAEDTFGEIGVLYCRPQPFAVRTTELSQILRLSRTSLMNYLHAYPQAAQIIMKNIFMRLKGHEGLDFEYSPRDPQMHQEMDNTGGSFPDSSTNNSDGETRLHNLVPEDGKGNLHANFHKDHPEMEENEKNQGPIRWKQKSLVDQQQNKSLSELANNHENRKILDEHIIDFLEPEIPFNYPLGKIYSTPYSSTSSHRTQRETERFFKKRVTIHCLSKHKTTLQEHGKLIILPDSLEELLHIAGEKFGGPKPTKVITTENAEIDDISVIRDEDHLFFLCSDTES* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02399 480 CDD CAP_ED 137 250 IPR000595 -
Phac11g02399 480 PRINTS EAG/ELK/ERG potassium channel family signature 51 60 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac11g02399 480 PRINTS EAG/ELK/ERG potassium channel family signature 33 44 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac11g02399 480 PRINTS EAG/ELK/ERG potassium channel family signature 7 24 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac11g02399 480 FunFam Potassium channel KAT2 125 261 - -
Phac11g02399 480 Pfam KHA, dimerisation domain of potassium ion channel 405 473 IPR021789 -
Phac11g02399 480 Pfam Cyclic nucleotide-binding domain 157 240 IPR000595 -
Phac11g02399 480 PANTHER POTASSIUM CHANNEL AKT1 316 475 IPR045319 GO:0005249|GO:0006813
Phac11g02399 480 MobiDBLite consensus disorder prediction 271 296 - -
Phac11g02399 480 SMART cnmp_10 137 254 IPR000595 -
Phac11g02399 480 MobiDBLite consensus disorder prediction 274 296 - -
Phac11g02399 480 SUPERFAMILY Voltage-gated potassium channels 3 59 - -
Phac11g02399 480 Pfam Ion channel 6 59 IPR013099 -
Phac11g02399 480 SUPERFAMILY cAMP-binding domain-like 64 257 IPR018490 -
Phac11g02399 480 Gene3D Jelly Rolls 104 266 IPR014710 -
Phac11g02399 480 Gene3D - 1 61 - -
Phac11g02399 480 ProSiteProfiles KHA domain profile. 406 480 IPR021789 -
Phac11g02399 480 ProSiteProfiles cAMP/cGMP binding motif profile. 137 256 IPR000595 -
Phac11g02399 480 MobiDBLite consensus disorder prediction 321 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02399 Phac-Chr11 35054543 35062045 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02399 2 473 Ion Channels AT5G46240 53.263 2.93e-165 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02399 K21867 - gmx:100800340 814.683