Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02394 ATGGCTGAGCAACCAATGATGAGTGATGTCGCTTCTTCCTCAAACTCTTCTTCTATGGCGTCTTGTAAAAAATATGATGTTTTTCTAAGCTTTCGAGGTGAGGACACTCGCATGAACTTCACCAGCCATCTTCATGAGGCTTTGAAGCAAAAAAAAGTAGAAACCTATATTGACTACCAGCTTGAGAAGGGAGATGAAATCTCACAAGGACTCATCAAAGCAATCGAAGATTCTCATGTATCGATTGTGATCATGTCAGAGAACTATGCTTCCTCAAAGTGGTGCCTAGAAGAACTGAGCAAGATTCTTGAATGCCAGAAAAACCAAGGACAAATTGTGATTCCAGTGTTTTACAACATAGACCCATCTCATGTGAGGAAGCAGAGTGGGAGCTATGAACAAGCCTTTGTAAAGCATCAGGAAGACCTCAGGTGCAACAAATGGAGAGCCGCTCTCACTGAAGTAGCCAATTTATCTGGGTGGGATTCTCGAAACAGGACTGAATCTAAACTCCTTATGGACATTGTTGGAGACATTTTGCGAAAACTGACTGCTAGATACCCAAATCAACTTAAAGGGCTGGTTGGAATTGAAGAAAATTATGAACAAATTGAATCATTACTAAGAATTGGGTCAAGAGAAGTTAGAATGCTTGGAAGATGGGGCATGGGTGGCATAGGAAAGACCACCCTTGCTACTGCTTTGTATGCACAACTTTCTTCTGAGTTCGAAGGTGGTTGCTTCCTCACAAATGTAAGGGAAAATTCAAGTAGGCATGGTGGACTTGAAGCTTTACACAAAAAACTTTATACTGAGTTGTTAGGTAATGAAAGTCATTGTTTTGATGCACCCCTTTTAGTACCACAGTTTGTCATGCATAGGCTTGGACATAAAAAAGTCTTCATTGTATTGGATGATGTGGCTACCTCTCAGCAATTGGAACATCTTACTAAAGATTATGGTTTGTTGGGACCAGGAAGTAGAGTCGTTGTTACAACTAGAGACAAACAAATTTTTAGACCAAATGATGAGATATATGAGGTGAAGAAATTGAGTTTTCATCGGTCTCTCGAACTTTTCAGTTTAACTGTTTTTGAAGAAAAAACACCTAAACATGGACACGAAGATTTATCAAGAAGGGCAGTTTCCTATTGCAAAGGTATTCCTTTGGCTTTGAAAGTTCTAGGTGCAAGTTTACGTCGAAGAAGTAAAGAAGCATGGGAAAGTGAACTGAGAAAACTCAAAAAGATCTCAAATAAGGAAATTAATAATGTATTAAAATTAAGTTATGATGGCTTAGATCGTTCTCAAAAGGACATCTTTCTAGATATTGCATGCTTCTTGAAAGGAAAAGATAGAGATTGGGTCACAAATCTATTGGAAGCTTGTGATTTCTTTGCAGCATCTGGAATAGAAGTTCTTTTAGATAAAGCTCTAGTAACAATTTCACATTACAATAGAATAGAAATGCACGATTTAATACAAGAAATGGGTCGAGAAATTGTTGATCAAGAATCTATTAAAGAGCCTGGAAGGCGAAGTCGATTGTGGAGACCGGAGGAAGTGCATCAAGTATTGAAACATAACTTGGGAACTGAAGTTGTTGAATGCATAACTTTAGATACGTGTAATCTAAACAGGGATCTAAATTTGAGCTCTAATTGCTTTGCAAAGATGGTTAGCTTGAGATTTCTTGACATACATTGTTCATTGTCGTCAACCCGATTTCATGTGTACCTTCCTAGTGGTCTGGAGTCACTTTCTGATAAATTGAGGTACTTTTATTGGGATGGATTTTGTCATGAGTCTTTGCCGTCTAACTTTCATGCAGAAGATCTTGTTGAGCTTTCCATGTATGGTAGCAAGCTTAAAAAGCTTTGGGATGGTGTTCAGAACCTTGTGAACTTGGAGAAAATTTACCTTGAAGCCTCTGGGAATCTGGTTGAGATTCCTGACTTATCTAAGGCCGAAAAACTTAGATCAATTGATCTCTCTTATTGTAAAAGCTTGCGTAAGCTCCACCCTTCCATATCATCTCTCCCTAAGCTTACAATGTTGGAATTGAGTGGCTGTACAGAGATTGAAAACCTGAATGTTCATTCAAAATATCTGCAGAGGTTGTACCTCAAAGGTTGTTCATCTCTCAAGGAGTTCTCAGTGACATCACATGAAATGACAATTTTGAACTTATCTTATACTGCTATATGTGCATTGCCATCATCAATTCAATTTAATAGGAAACTTACTTATCTTTTCCTAAATGGTTGCAACAATCTTGACCTGTTATCGAATCTAGACCATTTTGACTGCACTCAACACAACGTGAATCTATCATTCTTACAATCACTCCCCAACATCATTGGCCACTTGTTCTGTTTAAAAACTTTAGACTTAAGTGGAACTACTGTGGAGAATTTGCCTGAAAGCATAAAAAACCTTTCAATGATGACACTATTGATGTTAGATGATTGCAGGAAACTCGTGTCTCTATCAGAGCTTCCACCATCCTTGAAAATTCTGACAGCCTATAACAGCACTTCTTTGGAGACAGTCTCCAGTCAGTTACTTGTTTTTGAACACATGTTACAGAGTTGCACGCCCTGCTTATCCAAACAATATTATCCTAAGCAATTTGAGGGTGGATGTGTCGTTATCCCTGGAGACCATATCAGGAATGACTGTGGATTTCATACTAGAGATAGTTCAATAACTATCCCTTATCTCTCACTACCTGAATTGTGTGGTTTCATCTGTTGTGTCATTGTTTCTGAGGGATCAGTAGAGGGACATTTTTCGTGTTCTATCTATCAAGATAGCAAACAAGTGGGAATGGACGAAGGCAAATTATTGCACACATCTTTAATATCAGATCACGTGGCATTTTTGTTTGTTGAAACATGTGACCATCTTAGTGAAGTACCTTTTAAGTTTGAATTTAATTACGGTCAGAAAACTGAAAAAGTTATAATCAAAGAGTGTGGAGTCTTCCCAGTGTATGCCTCAGAATCAGGGTTGAAGTTGTTTGAATTGGAATCTATTACTCAAATCTTCAATGAGTCACAATCCAGAGCAATTGGAGTTGGAGTTAGATGCTCTAATGCTGAAAATGGATTAGAATCCTTTGTTGAAGTATCTAATAATGAGTCCCAGCTCACAGAGATTGGAGTTCATGGATCAAATAATGAAAATGAGTGGGAAGAACTTCTTCATGTGATTACTTCATCGGTTTTCTTTTGA 3237 0.38 MAEQPMMSDVASSSNSSSMASCKKYDVFLSFRGEDTRMNFTSHLHEALKQKKVETYIDYQLEKGDEISQGLIKAIEDSHVSIVIMSENYASSKWCLEELSKILECQKNQGQIVIPVFYNIDPSHVRKQSGSYEQAFVKHQEDLRCNKWRAALTEVANLSGWDSRNRTESKLLMDIVGDILRKLTARYPNQLKGLVGIEENYEQIESLLRIGSREVRMLGRWGMGGIGKTTLATALYAQLSSEFEGGCFLTNVRENSSRHGGLEALHKKLYTELLGNESHCFDAPLLVPQFVMHRLGHKKVFIVLDDVATSQQLEHLTKDYGLLGPGSRVVVTTRDKQIFRPNDEIYEVKKLSFHRSLELFSLTVFEEKTPKHGHEDLSRRAVSYCKGIPLALKVLGASLRRRSKEAWESELRKLKKISNKEINNVLKLSYDGLDRSQKDIFLDIACFLKGKDRDWVTNLLEACDFFAASGIEVLLDKALVTISHYNRIEMHDLIQEMGREIVDQESIKEPGRRSRLWRPEEVHQVLKHNLGTEVVECITLDTCNLNRDLNLSSNCFAKMVSLRFLDIHCSLSSTRFHVYLPSGLESLSDKLRYFYWDGFCHESLPSNFHAEDLVELSMYGSKLKKLWDGVQNLVNLEKIYLEASGNLVEIPDLSKAEKLRSIDLSYCKSLRKLHPSISSLPKLTMLELSGCTEIENLNVHSKYLQRLYLKGCSSLKEFSVTSHEMTILNLSYTAICALPSSIQFNRKLTYLFLNGCNNLDLLSNLDHFDCTQHNVNLSFLQSLPNIIGHLFCLKTLDLSGTTVENLPESIKNLSMMTLLMLDDCRKLVSLSELPPSLKILTAYNSTSLETVSSQLLVFEHMLQSCTPCLSKQYYPKQFEGGCVVIPGDHIRNDCGFHTRDSSITIPYLSLPELCGFICCVIVSEGSVEGHFSCSIYQDSKQVGMDEGKLLHTSLISDHVAFLFVETCDHLSEVPFKFEFNYGQKTEKVIIKECGVFPVYASESGLKLFELESITQIFNESQSRAIGVGVRCSNAENGLESFVEVSNNESQLTEIGVHGSNNENEWEELLHVITSSVFF* 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02394 1078 ProSiteProfiles TIR domain profile. 23 183 IPR000157 GO:0007165
Phac11g02394 1078 Gene3D - 351 434 IPR042197 -
Phac11g02394 1078 SUPERFAMILY L domain-like 490 843 - -
Phac11g02394 1078 Gene3D - 185 345 IPR027417 -
Phac11g02394 1078 Gene3D - 21 184 IPR035897 -
Phac11g02394 1078 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 444 IPR027417 -
Phac11g02394 1078 Pfam Leucine Rich Repeat 612 631 IPR011713 -
Phac11g02394 1078 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 848 IPR044974 GO:0006952
Phac11g02394 1078 Pfam NB-ARC domain 204 426 IPR002182 GO:0043531
Phac11g02394 1078 Pfam TIR domain 24 194 IPR000157 GO:0007165
Phac11g02394 1078 PRINTS Disease resistance protein signature 385 399 - -
Phac11g02394 1078 PRINTS Disease resistance protein signature 678 694 - -
Phac11g02394 1078 PRINTS Disease resistance protein signature 217 232 - -
Phac11g02394 1078 PRINTS Disease resistance protein signature 294 308 - -
Phac11g02394 1078 FunFam Disease resistance protein (TIR-NBS-LRR class) 21 185 - -
Phac11g02394 1078 SMART till_3 24 158 IPR000157 GO:0007165
Phac11g02394 1078 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 161 IPR035897 -
Phac11g02394 1078 Gene3D Ribonuclease Inhibitor 503 724 IPR032675 -
Phac11g02394 1078 Gene3D Ribonuclease Inhibitor 725 871 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02394 Phac-Chr11 34984212 34990552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02394 19 854 WRKY Transcription Factor Family AT4G12020 33.411 1.72e-115 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02394 - - gmx:100813283 1280.77