Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02373 ATGGACTGCCAATGCATCCATGTTGTTATTGAAGGAAGTGTCTCATTCAACAATAAAAGTCTACATGCTATTGGAAATACACCTAACCCCTATGAGAAAGCCATCACTATTATTGGCAAAACTCTGGCTCCCTTTGATGATGACAACTTGATTCCTTGTTTTGGCTTTGGTGATGCCACCACTCATGATCGAGAAGTGTTTAGCTTTCACAGTGATCATTCATCTTGCCATGGATTTGAGGAGGTTTTGACTTGCTATCAGAAAATTGTTCCAAACTTAAGACTTTCAGGACCAACTTCTTACGCTCCAGTGATTGAGGCTGCAATAGACATAGTTGAGCAAAGTCATGGTCAATTCCATGTGTTAGTTATTATTGCAGATGGCCAGGTTACAACAAGTGCTGCCTCTGAAGATGGAGAACTAAGTCCACAAGAAGCAAGGACTATCAAAGCAATAGCTGATGCAAGTTCATATCCCATGTCTATTATTCTGGTTGGAGTTGGTGATGGACCTTGGGATGACATGAAGAAGTTTGACGACAAGATACCGGCTCGCGAATTTGACAATTTTCAGTTTGTTAACTTCACTGACATAATGTCTAAGAAATCAAGCTCCTCTGAAAAAGAAGCTGCTTTTGCTCTGGCTGCACTAATGGAAATACCTTTCCAATATAAAGCAGCCATTGAACTGGGACTACTTGGTCGAGTAACAGGAAGGGCAAATAAAATTGTTCCAAGACCTCCTCCAGCTCCTTATTCTAGGCTTGTGCCACCAGCTCGTGTTCTCAGCAATATGCCAATTTTCATGGATGATGAGAGAAATCAAATGGCATGTGCTATTTGTCTGACAAGTAGAAAGGATTTGGCCTTTGGATGTGGTCACATGACCTGTAGAGACTGTGGATCCAGGTTAAGTAACTGTCCAATATGCCGTCAGAGGATCACCAATCGTCTGAGGGTGTTTTCTAGCTGA 972 0.4187 MDCQCIHVVIEGSVSFNNKSLHAIGNTPNPYEKAITIIGKTLAPFDDDNLIPCFGFGDATTHDREVFSFHSDHSSCHGFEEVLTCYQKIVPNLRLSGPTSYAPVIEAAIDIVEQSHGQFHVLVIIADGQVTTSAASEDGELSPQEARTIKAIADASSYPMSIILVGVGDGPWDDMKKFDDKIPAREFDNFQFVNFTDIMSKKSSSSEKEAAFALAALMEIPFQYKAAIELGLLGRVTGRANKIVPRPPPAPYSRLVPPARVLSNMPIFMDDERNQMACAICLTSRKDLAFGCGHMTCRDCGSRLSNCPICRQRITNRLRVFSS* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02373 323 Pfam Copine 20 233 IPR010734 -
Phac11g02373 323 SMART ring_2 278 310 IPR001841 -
Phac11g02373 323 SMART VWA_4 3 198 IPR002035 -
Phac11g02373 323 ProSiteProfiles Zinc finger RING-type profile. 278 311 IPR001841 -
Phac11g02373 323 PANTHER COPINE FAMILY PROTEIN 1 11 299 - -
Phac11g02373 323 Gene3D von Willebrand factor, type A domain 6 211 IPR036465 -
Phac11g02373 323 SUPERFAMILY vWA-like 7 178 IPR036465 -
Phac11g02373 323 SUPERFAMILY RING/U-box 272 317 - -
Phac11g02373 323 Pfam Zinc finger, C3HC4 type (RING finger) 275 315 - -
Phac11g02373 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 269 323 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02373 Phac-Chr11 34750404 34759744 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02373 K16280 - gmx:100803177 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g02373 11 34750404 34759744 Phac11g02373 11 34750404 34759744 ECH