Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02363 ATGGAAAGAATGTTCCCTCCTAAGAAGCCTTCAACTATGAATTCCCATGACAGACCCTTGTGTGTTCAAGGTGACTCAGGGCTTGTCCTCACCACAGACCCTAAGCCACGTCTTCGTTGGACTGTTGAACTGCATGAACGCTTTGTTGATGCTGTTGCTCAGCTTGGAGGACCTGATAAGGCCACTCCTAAGACAATCATGAGGGTTATGGGAGTGAAGGGTCTCACCCTTTACCACCTCAAGAGCCACCTTCAGAAATTCAGACTTGGAAAGCAGCCCCACAAGGATTTCAATGAACACTCTATTAAGGATGGCATGAGAGCTTCTGCTTTAGAGCTTCAGAGAAATATTGGCTCCTCTTCTGCCATGATTGGTCGCAACATGAACGAGATGCAAATGGAAGTGCAGAGAAGACTGCATGAACAACTAGAGGTTCAGAAAAACCTTCAGCTGAGGATTGAGGCTCAAGGAAAGTACATGCAGAGCATATTGGAGAAGGCTTATCACACACTTGCAGGTGAAAACATGGGCACAAGCATGAAGGGTATGGGAGGAGCTCAAGGAAGCAGTGAGATGGGGGTGATGAAGGACTTTTGTCCTATGAATTACCCTTCTTTTCAAGACCTTAACTTGTATGGTGGTGGTGGTGGTGGTGAGCAACTTGAAGGGTTTATGGGATCAAACAATGAGGGTGTGTTTGAGGGAAAGAAGAGGCTTTACCCCTACAGTGGAAGTGGGAAGAGTCCATTGATCTGGTGTGATGATCTCAGGCTTCAAGATCTGGGAACAACTTCATCATGCATTAGCCCTGAAGAGGACCCTTTCAAAGGTGATCATCATCACAACAAGGTTCAGATTTCACCACCATCAATGGATAGTGATCCCATGTCAGAGATCTATGACACAAAGCCATTGATGGTACTCCATGGAGAAAGTGTAGGCAATCACAAGAAATTTGATGCTTCTTTGAAGCTAGAAAGGCCATCACCACAAAGATCACCACTTCAACCAGAAAGGAATAGTCCTATCATCAATGCTACTTCCATCACACAAGGGTTTTGA 1062 0.4548 MERMFPPKKPSTMNSHDRPLCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFNEHSIKDGMRASALELQRNIGSSSAMIGRNMNEMQMEVQRRLHEQLEVQKNLQLRIEAQGKYMQSILEKAYHTLAGENMGTSMKGMGGAQGSSEMGVMKDFCPMNYPSFQDLNLYGGGGGGEQLEGFMGSNNEGVFEGKKRLYPYSGSGKSPLIWCDDLRLQDLGTTSSCISPEEDPFKGDHHHNKVQISPPSMDSDPMSEIYDTKPLMVLHGESVGNHKKFDASLKLERPSPQRSPLQPERNSPIINATSITQGF* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02363 353 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 13 180 IPR044848 GO:0003700
Phac11g02363 353 MobiDBLite consensus disorder prediction 333 353 - -
Phac11g02363 353 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Phac11g02363 353 MobiDBLite consensus disorder prediction 1 20 - -
Phac11g02363 353 Pfam MYB-CC type transfactor, LHEQLE motif 131 169 IPR025756 -
Phac11g02363 353 MobiDBLite consensus disorder prediction 267 294 - -
Phac11g02363 353 FunFam Myb family transcription factor 34 92 - -
Phac11g02363 353 MobiDBLite consensus disorder prediction 325 353 - -
Phac11g02363 353 Gene3D - 34 92 - -
Phac11g02363 353 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Phac11g02363 353 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Phac11g02363 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02363 Phac-Chr11 34703909 34708199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02363 4 340 G2-like Transcription Factor Family AT1G79430 56.077 9.59e-116 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac11g02363 Myb_DNA-binding 4.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02363 - - gmx:100796268 588.186