Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02355 ATGAGTGAACAAAGAAATTTTGTATGTGGGTTGTGTAGGTATCAACATAAACGTCACGATGGTAGCTGTGAATTTGGTCAGTATTTTCCCATTAATAGGTTAAGAGAGATTGAGAGTGCTAGCAAGTTTTTTGGTATGGCCAATTTGCTTAGATTGATGCGTGGTGCTGAACCCTCTCAAAGACAAGTTATGGCTAATTCCATTTTAAGGGAGGCTCAAATGTGGGCCAATGATCCCATTCATGGTGCCCTAGGTCATATTCTTACTCTCAGCAATCAAATCAAATCTGTTGGAAGAGAGTTAAAACTTGTAAACACCATGCTTGCTCAATGCTCACATCAAGCACCTCCACAGATTGCAAATAGAGTTCAGGTAAGAGTTCTTTTTTAA 390 0.3923 MSEQRNFVCGLCRYQHKRHDGSCEFGQYFPINRLREIESASKFFGMANLLRLMRGAEPSQRQVMANSILREAQMWANDPIHGALGHILTLSNQIKSVGRELKLVNTMLAQCSHQAPPQIANRVQVRVLF* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02355 129 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Phac11g02355 129 Pfam Lateral organ boundaries (LOB) domain 9 104 IPR004883 -
Phac11g02355 129 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02355 Phac-Chr11 34636799 34637605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02355 9 94 AS2 family AT2G19820 41.379 6.07e-20 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac11g02355 LOB 2.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02355 - - pvu:PHAVU_011G178700g 231.106