Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02354 ATGAGTGAACAAAGAAATTTTGTATGTGGGTTGTGTAGGTATCAACATAAACGTCACGATGGTAGCTGTGAATTTGGTCAGTATTTTCCCATTAATAGGTTAAGAGAGATTGAGAGTGCTAGCAAGTTTTTTGGTATGGCCAATTTGCTTAGATTGATGCGTGGTGCTGAACCCTCTCAAAGACAAGTTATGGCTAATTCCATTTTAAGGGAGGCTCAAATGTGGGCCAATGATCCCATTCATGGTGCCCTAGGTCATATTCTTACTCTCAGCAATCAAATCAAATCTGTTGGAAGAGAGTTAAAACTTGTAAACACCATGCTTGCTCAATGCTCACATCAAGCACCTCCACAGATTGCAAATAGAGTTCAGGATAATCTTGTTGCTAGCTCTTCTAACCCACCACAATCAAGTACTGTTGCATCTCAGGAGAAAGAGGGTGCTGCTGAGGAGAAAGAAGCTGAGGTTAAGAGAAAGAAGGGGAAAAAAAAACATTGA 498 0.4056 MSEQRNFVCGLCRYQHKRHDGSCEFGQYFPINRLREIESASKFFGMANLLRLMRGAEPSQRQVMANSILREAQMWANDPIHGALGHILTLSNQIKSVGRELKLVNTMLAQCSHQAPPQIANRVQDNLVASSSNPPQSSTVASQEKEGAAEEKEAEVKRKKGKKKH* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02354 165 MobiDBLite consensus disorder prediction 125 144 - -
Phac11g02354 165 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Phac11g02354 165 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 146 - -
Phac11g02354 165 Pfam Lateral organ boundaries (LOB) domain 9 104 IPR004883 -
Phac11g02354 165 MobiDBLite consensus disorder prediction 125 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02354 Phac-Chr11 34636122 34637605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02354 9 94 AS2 family AT2G19820 42.529 4.07e-19 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac11g02354 LOB 4.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02354 - - pvu:PHAVU_011G178700g 263.077