Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02338 ATGGAAGACATAAACAGGTGGCTATTATCGTCTTATTTGAATGAAAGTGTTAACCATGATTTTGCCATCAGAAGGTATTGTCCAGCAAGAATGGAGCAAGAGCAAGGAGGAGAGTGCCAAGATCAAGAGGGAGTGGTTTTTGATGATACTGAGTTATGTTCTTCTGATGACAGCACTCCTTGTTTGGGTTCATCAGAAGTTGATGACTTTGTTGATAGCTTCATCAACATGGATCAGTATGAGAAAGCAGATCAAGGGTACCAAGAGAAGCATCAAAGTTTTGGCCACTTTGTGGTGAGTAATGATGATGATGAGGCTGATGAATACTCCTCCATGAATGATGGTGTCTTTGGATATCTTCCAACCACCATGGAGGATTCAGAATTGGAGATCTATGAAAATCTCACAACATCCATGTTGGAGGAAGAGGTTGTTGCAATGAGTGACACTTTTGGTGCAATACCTGAGTTTGTGCATTGTCCCAAAGAGGCCAACCTTGGTGTGGACCAAGGATTGGAGTTGGTTCACATGCTGCTGGCCTGTGCTGAAGCTGTGGGGTGTAGGGACAACCAGCAAGCAGAGTTGCTGATCAGAAGAATTTGGACTTTGGCAAGCCCTTCAGGAGATGCACTGCAAAGAGTTTCCTACTGTTTTGCCACAGGATTGAAGTGTAGATTGTCACTTCTTCCATATAATGTCATTACAAATGGTACACTCACAGATACTTCCATGGATATGCCTTTGATCAATAGGGAGAATAAGATGGAAGCATTTCAACTTCTTTACCAAACCACACCTTACATTGCCTTTGGTTTCATGGCTGCAAATGAAGCCATATGCCAAGCATCACAAGGAAAGAGCTCAATACACATTGTTGATTTAGGAATGGAGCATACCCTTCAGTGGTCTTCCCTCATAAGGGCCTTTGCTTCAAGGCATGAGGGTCCTCCAATGCTCCGGATCACAGGATTAACCGACCATGAAGATAACTCTAAACTTCAAACTAGCATGAGTGTGCTTGTGGAGGAAGCAAGCTCTTTGGGAATGCATCTTGAATTCCAGACAATTTCTGAGCCTGCATCTCCTTCTCTTCTTACTGTGGAGAAGCTGAACTTGAGAAAAGGTGAAGCTTTATTTGTCAATAGTATCTTGCAGTTGCACAAATATGTCAAAGAAAGTAGAGGCTATCTGAAGGAAATTCTGCTATCAGTGAAGAAGCTAGGTCCAACTGCTTTTACAGTGGTAGAGCAAGACACAAACCACAATGGCCCTTTCTTCCTTGGCAGATTTTTGGAATCACTTCACTATTACTCAGCCATATTTGATTCTCTTGAGGCATGTATGCCAAGAAATAGCCAACACAGGATGAAGATAGAGAGATTACACTTTGCAGAGGAAATTCAGAACATTGTAGCTTATGAGGGTCCAGAAAGAACAGAAAGACATGAAAGGGTAGACCAATGGAGAAGGCAATTAGGCCGAGCAGGATTTCAGGTGATGCCATTGAAGTGCACAAGCCAAGTTAGAATGATGCTTTCTGTTTATGAGTGTGATGGATACACATTATCCTGTGAGAAGGGAAACCTTCTACTTGGATGGAAAGGAAGGCCAGTGATGATGTCTTCTGCATGGAAAGTGGCAAGTATGTGA 1650 0.4267 MEDINRWLLSSYLNESVNHDFAIRRYCPARMEQEQGGECQDQEGVVFDDTELCSSDDSTPCLGSSEVDDFVDSFINMDQYEKADQGYQEKHQSFGHFVVSNDDDEADEYSSMNDGVFGYLPTTMEDSELEIYENLTTSMLEEEVVAMSDTFGAIPEFVHCPKEANLGVDQGLELVHMLLACAEAVGCRDNQQAELLIRRIWTLASPSGDALQRVSYCFATGLKCRLSLLPYNVITNGTLTDTSMDMPLINRENKMEAFQLLYQTTPYIAFGFMAANEAICQASQGKSSIHIVDLGMEHTLQWSSLIRAFASRHEGPPMLRITGLTDHEDNSKLQTSMSVLVEEASSLGMHLEFQTISEPASPSLLTVEKLNLRKGEALFVNSILQLHKYVKESRGYLKEILLSVKKLGPTAFTVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEACMPRNSQHRMKIERLHFAEEIQNIVAYEGPERTERHERVDQWRRQLGRAGFQVMPLKCTSQVRMMLSVYECDGYTLSCEKGNLLLGWKGRPVMMSSAWKVASM* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02338 549 ProSiteProfiles GRAS family profile. 165 545 IPR005202 -
Phac11g02338 549 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 130 540 IPR005202 -
Phac11g02338 549 Pfam GRAS domain family 174 545 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02338 Phac-Chr11 34470752 34472401 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02338 169 546 GRAS Transcription Factor Family AT1G66350 37.887 2.29e-75 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac11g02338 GRAS 5.6e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02338 - - gmx:100814931 895.96