Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02301 ATGAAGGATGGTGGTAGAAAACAAGGTACACTGTCACCATGTGCAGCATGCAAGCTTCTTCGAAGGAGATGCGCAAAGGACTGTGTCTTTGCTCCTTATTTTCCTGCAGATGAGCCCCATAAGTTTGCCAGTGTGCACAAGGTTTTTGGGGCCAGCAATGTCAACAAAATGTTACAGGAGCTAGCAGAGTACCAACGAAGTGATGCTGTGAGTTCAATGGTGTATGAAGCGAATGCAAGGGTGAGAGATCCCGTGTATGGATGTGTGGGAGCCATATCCTCTCTGCAGCAACAAGTTGATGTTTTACGAACCCAGTTGGCACTTGCAGAAGCAGAGGTTATGCAGATGAGAATGAGCCAGGTTTCAAGTTCCTCTCAGCAACCAAAACCAGTTCCTGCACCCTCCAATTCATCCTCACAAAACTTGTCTCCATCAAGAAGACTTGCCATGGCCACCACCAACTCCCTTTTTGCCATGGACATGGTCGTTGATCACCCCAACATGGGCGAGTCTTTGTGGTCGTGTTAG 528 0.4811 MKDGGRKQGTLSPCAACKLLRRRCAKDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELAEYQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLRTQLALAEAEVMQMRMSQVSSSSQQPKPVPAPSNSSSQNLSPSRRLAMATTNSLFAMDMVVDHPNMGESLWSC* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02301 175 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Phac11g02301 175 Coils Coil 92 112 - -
Phac11g02301 175 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 139 - -
Phac11g02301 175 MobiDBLite consensus disorder prediction 118 146 - -
Phac11g02301 175 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02301 Phac-Chr11 34080762 34086724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02301 1 175 AS2 family AT1G31320 64.000 1.42e-68 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac11g02301 LOB 5.2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02301 - - ccaj:109811748 256.914