Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02278 ATGGGATGGATGTCACAAGGTTTTGCTTTTGCACTTGTTGCTGTGTTCTTCTGTCACTTCAGTTGCTTTCTTAGCTCTGCACAAGCTCAATCTGCAAACGCCACCACTGACCCTTCTGAAGCAAGAACTATAAATTCAATCTTCAGCAAATGGGGTATATCAGCAGACACAAGTATATGGAATATAAGCGGTGAATTGTGCAGTGGAAGAGCCATTGATAGTACCTCCACCCCTGAATCTTTCAACCCATTCATCAGATGTGACTGTTCCTTTGACGATGGAACTACTTGCCGCATCACAGCACTGAGGGTCTATGCACTGAACGTGGTTGGTGAAATTCCTGAAGAGCTATGGACTCTCACCTATCTCAACAATTTAAATCTTGCGCAAAATTACTTGACGGGTTCTCTACCTGCAGCTATTGGAAATCTTACTCGTATGCAATACTTGAGCCTTGGAACCAATAATTTATCAGGGGAGCTTCCAAAGGAATTGGGAAATCTTGCAGAGTTATTATCACTGAGTTTTTCGTCAAACAAGTTCTCAGGATCTCTCCCATCTGAACTTGGGAAACTCACAAAGTTAACCCAACTCTACTTTGATAGTTCAGGAATTAGTGGTCCAATTCCGTCCTCATTTGCAGACCTAAGGAGTTTGGAACACGTATGGGCTTCAGACACGGAACTCAGGGGCAATATACCAGACTTCATAGGGAATTGGACTAGGCTTAAAGTCTTGAGGTTTCAAGGCATTTCTTTTAATGGCTCAATACCCTCATCATTTTCCAACTTGACTTCTTTAACAGAATTGAGAATAAGTGGTTTATCTGATGGGAACTCCTCACTGGAATTTGTACGGAATATGAAATCTTTGAATATCTTAGAATTGAGGAATAACAATATTTCTGGTTCGATTCCATCCTCCATTGGGGAGTTGCACAATTTGACCCAGCTGGATTTAAGCTTCAATAACATCGAGGGACAAATTCCGGCATCAATTTTCAATCTGAGTTCGCTCTCTACCTTGTTTCTTGGAAATAATAAGCTAAATGGCACCCTTCCGACGCAGAAAAGTTCATCATTTCAATATATAGACTTGTCATACAATGATCTATCAGGTAGCCTCCCCTCTTGGGTAAACGATGCAAATTTACAAGTGAATTTAGTTGCTAACAACTTGACAATAGATGATGGTTCAGATACCAGTGGCTTGCCAAATGGGCTCAACTGTCTCCAGAAAAATTTTCCTTGCAATCGAGGTGTTGGAAGATATTCTGACTTTGCAATCAAGTGTGGTGGTTCCCAAATTACGTCCACAGAAGGAATAGTGTATGAAACGGAGAATGAGACACTTGGTCCTGCTACATACTTTGTTACTGATACAAGTAGATGGGCTGCTAGTAATGTTGGATTATTTACGAACAATAATAATCCAGCATTCACAAGCTTTGTGTCTAATCAATTCACTAACACTATGAATTCGGAGCTCTTCCAAACAGCACGACTCTCTCCTTCATCATTGAGATATTATGGCTTGGGGCTGGAAAATGGCTTTTACAACATCACCCTTCAATTTGCAGAAACATCTATTGAGGATTCTACTACAAGATGGCAAAGTCTTGGGAGACGAGTCTTTGATATATATATTCAGGGGAATCTTGTCTTGAAAGATTTCGACATACAAAAGGAAGCTGGGGGCATATCATTCAGAGCTGTCCAAAAGCAATTTAGGTTTGAAGTGTCTGAAAACTATCTTGACATCCATCTCTTTTGGGCTGGAAAGGGGACTTGTTGCATACCAGCTCAAGGTACTTATGGGCCCTTGATTCAAGCCATCCATGCTATCCCAGATTTTATACCTAGTGTCAGTAACGAACCTCCAAGCAATAAAACAAATAGAACTGGCCTAATTGTTGGAATTGTTGTTGGAGTTGGAGTTGTAAGCTTCCTATCAGTTTTTGTGACTTTTTGTATCATTCGGAGAAGAAAACGTCAGCATGAGGATGAAGAGCTTTTAGGAATTGATACAAAGCCATACACTTTCAGTTATTCTGAGTTGAAGAATGCTACTAATGACTTTAATATCGAAAATAAGCTTGGAGAGGGAGGTTTTGGACCTGTTTATAAGGGGACACTTAATGATGGAAGAGTTATTGCTGTGAAACAACTGTCAGTAGCATCCCATCAAGGAAAGAGCCAGTTCATAACTGAGATTGCTACTATATCAGCTGTACAACATCGTAATCTGGTGAAACTATATGGATGTTGTATTGAGGGAAACAAAAAGCTTCTGGTGTACGAGTATCTGGAGAATAAGAGTCTTGATCAAGGATTATTCAGTAATTCTTTAACCCTCAATTGGTCCACACGCTATGATATCTGCTTGGGTGTTGCCAGAGGTTTAGCTTATTTACATGAAGAGTCCCGTCTCCGTATTGTACACCGTGATGTGAAGGCTAGCAATATTTTACTTGACTATGAGCTTGTCCCCAAAATATCAGATTTTGGGTTGGCCAAATTGTACGATGATAAAAAGACCCACATAAGCACTCGTGTGGCTGGAACAATTGGATATCTTGCACCGGAGTATGCCATGCGTGGACACCTTACAGAGAAAGCAGATATATTTTCATTTGGTGTTGTTGCTCTAGAGTTAGTCAGTGGGAGACCAAATTCTGATTCAAGCTTGGAAGGAGAGAAGGTGTATCTTCTAGAATGGGCTTGGCAGCTTCATGAAAACAACCTCTTAATGGATCTGGTGGACCCTAGATTATCAGAATTCAATGAGGAAGAAGTAAAACGTGTTGTGGGAATAGCACTTCTGTGCACTCAGACATCACCATCATTAAGACCATCAATGTCCCGTGTGGTGGCAATGCTTTCAGGAGATATTGAAGTGAGCAGTGTCACTACAAAGCCTGGATACCTTACTGACTGGAAATTTGATGATGTGAGCAGCTTCATGACTGAGAGTGCAATCGAAGGATTGAATACAAGTCACCAGTATTCATCAGGAAGTACCAGCATGGTGGGTGGTGCAGACTTTTCACCAATAAGTGTTTCAAAACCGATCCTTAATCATGGTCTTAGTGAGGGTAGGTAA 3102 0.4084 MGWMSQGFAFALVAVFFCHFSCFLSSAQAQSANATTDPSEARTINSIFSKWGISADTSIWNISGELCSGRAIDSTSTPESFNPFIRCDCSFDDGTTCRITALRVYALNVVGEIPEELWTLTYLNNLNLAQNYLTGSLPAAIGNLTRMQYLSLGTNNLSGELPKELGNLAELLSLSFSSNKFSGSLPSELGKLTKLTQLYFDSSGISGPIPSSFADLRSLEHVWASDTELRGNIPDFIGNWTRLKVLRFQGISFNGSIPSSFSNLTSLTELRISGLSDGNSSLEFVRNMKSLNILELRNNNISGSIPSSIGELHNLTQLDLSFNNIEGQIPASIFNLSSLSTLFLGNNKLNGTLPTQKSSSFQYIDLSYNDLSGSLPSWVNDANLQVNLVANNLTIDDGSDTSGLPNGLNCLQKNFPCNRGVGRYSDFAIKCGGSQITSTEGIVYETENETLGPATYFVTDTSRWAASNVGLFTNNNNPAFTSFVSNQFTNTMNSELFQTARLSPSSLRYYGLGLENGFYNITLQFAETSIEDSTTRWQSLGRRVFDIYIQGNLVLKDFDIQKEAGGISFRAVQKQFRFEVSENYLDIHLFWAGKGTCCIPAQGTYGPLIQAIHAIPDFIPSVSNEPPSNKTNRTGLIVGIVVGVGVVSFLSVFVTFCIIRRRKRQHEDEELLGIDTKPYTFSYSELKNATNDFNIENKLGEGGFGPVYKGTLNDGRVIAVKQLSVASHQGKSQFITEIATISAVQHRNLVKLYGCCIEGNKKLLVYEYLENKSLDQGLFSNSLTLNWSTRYDICLGVARGLAYLHEESRLRIVHRDVKASNILLDYELVPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADIFSFGVVALELVSGRPNSDSSLEGEKVYLLEWAWQLHENNLLMDLVDPRLSEFNEEEVKRVVGIALLCTQTSPSLRPSMSRVVAMLSGDIEVSSVTTKPGYLTDWKFDDVSSFMTESAIEGLNTSHQYSSGSTSMVGGADFSPISVSKPILNHGLSEGR* 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02278 1033 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 998 - -
Phac11g02278 1033 FunFam Os05g0263100 protein 41 277 - -
Phac11g02278 1033 Pfam Protein tyrosine and serine/threonine kinase 694 960 IPR001245 GO:0004672|GO:0006468
Phac11g02278 1033 FunFam Leucine-rich repeat receptor-like protein kinase 424 616 - -
Phac11g02278 1033 Pfam Malectin domain 426 612 IPR021720 -
Phac11g02278 1033 SMART serkin_6 693 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02278 1033 CDD STKc_IRAK 699 960 - -
Phac11g02278 1033 ProSiteProfiles Leucine-rich repeat profile. 314 336 IPR001611 GO:0005515
Phac11g02278 1033 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Phac11g02278 1033 SUPERFAMILY L domain-like 89 396 - -
Phac11g02278 1033 FunFam Putative LRR receptor-like serine/threonine-protein kinase 769 972 - -
Phac11g02278 1033 FunFam Putative LRR receptor-like serine/threonine-protein kinase 278 401 - -
Phac11g02278 1033 Gene3D Ribonuclease Inhibitor 279 397 IPR032675 -
Phac11g02278 1033 Gene3D - 426 616 - -
Phac11g02278 1033 SUPERFAMILY Protein kinase-like (PK-like) 676 986 IPR011009 -
Phac11g02278 1033 FunFam Leucine-rich repeat receptor-like protein kinase 662 768 - -
Phac11g02278 1033 Gene3D Phosphorylase Kinase; domain 1 654 768 - -
Phac11g02278 1033 Gene3D Transferase(Phosphotransferase) domain 1 769 972 - -
Phac11g02278 1033 Gene3D Ribonuclease Inhibitor 45 203 IPR032675 -
Phac11g02278 1033 Gene3D Ribonuclease Inhibitor 204 278 IPR032675 -
Phac11g02278 1033 ProSiteProfiles Protein kinase domain profile. 693 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02278 Phac-Chr11 33781906 33800307 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02278 74 287 Receptor kinase-like Gene Family AT1G56120 25.701 5.74e-10 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac11g02278 PK_Tyr_Ser-Thr 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02278 - - gmx:100798233 1617.82