Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02277 ATGACAGAGGTAGTTCCTGGAACTGAAGAGGCTGCTGAACCTCCAGCATCACCTCAAACATCTCCTGATGTGCCACATAATATGGAAACAGAACAATTCACTCCTACAAAGTATTCTATTATCAGTAGGAATGGGGTTGGGACCACAGGAAAAAACATATCTTTACTTGTGAATCTTTTCAAAGTTTCTGTCAATGCTCCAGACACAGTGTTTTTCCAGTATAGTGTTGCTATTACTTTAGAAGATAAGCGAGCAGTTGAAAGCAAGGGCATTGGGAGAAAAGTGATTGATAGGCTTTACCAAATATACTCTTCTGAACTTGGTGGCAAAAGGTTTGCCTATGATGGAGGGAAAACTTTGTACACAACGGGTCCTCTGCCACTAAATAAGTATGAGTTCAAAGTGTTTTTGGAGGAATCGTTTAGAAAACGTAGTGCTGGTGCGGATGGAAGTCTTCTTGAGGAAACTAAACGGTCAAAAAATTCTTTTCAGTCAAAGACATTCACGGTGGAGATAAGTTTTGCTGCCAAAATACCCATGCAGGCCATTGCTGTTTCTCCGAAAGAGGTTGACTCAGATGCCAATTCTCAAGATGCGTTGAGAGTGCTTGATACTGTACTGAGGCAGCGTGCAGCTGACTGTGGATGTCTTTTAGTAAGGCAGTCTTTTTTTCATGATGACCCAAGAAATTTCACTGATGTTGGGGCTGGTGTAACAGCAGTCTCGGGTTTTCATTCGAGTTTTCATCCCACACAGCGAGGATTGACTCTCAATATGGACGTGTCAACAACTATGATCATAAAACCTGGTCCTGTAATTGATTTTCTGTTATCAAATCAGCAAGTGAGGGAATCCCGTTATATTGACTGGGAAAAGGCCAAAAAAGTGCTTAAAAATTTAAGGGTGCTAGCAACTCATCGAAACTTGGAATTTAAAATTTCTGGCTTGAGTGAGAAACCGTGCATTCAGCAACTTTTTAGTATGAAGGTTAAAAATGACAACGGCAATAATGAAGGACAGATGGTGGAGATTACTGTATATGAATATTTTGCCAAACATTGTGGCATTGATCTGACCACATCTGCCTATCTTCCATGTCTTGATGTTGGAAAACCAAAACGGCCCAACTATCTTCCTTTGGAGTTATGTTCACTTGTGTCCCTCCAACGCTATACAAAGGTACTCTCTCCGATGCAAAGAGCATCTTTAGTTGAGAAATCACGCCAAAAGCCTCAAGATAGAATCAAAATTCTGAAACATGCTGTAGGAAACTATTGCTACGATGATGATCCTGTTCTTGCTGCATGTGGAATTTCTGTTGAGAAAGAATTTGCTCTTGTTGAAGGTCGTGTTCTTGAGGCTCCAAAGTTGAAGGTTGGTAAGAATGATGTTTGCATCCCATGTAATGGAAGGTGGAATTTTAATAAGAAGACACTTCTACAACCATCGCATATTGATTATTGGGCTGTTGTCAACTTTTCTGCAAGATGTGATACTAGTTACATATCAAGGGAGCTGATCAGATGTGGAATGAGCAAGGGCATTAACATTGAACGGCCGTACTCTTTGATAGAGGAGGAACCACAGTTGAGAAAATCTAACCCTGTTACAAGGGTTGAAAGAATGTTTGACCTGCTGAAGTCAAAACTAAATAAAGAACCAAAGTTGATTCTATGTGTCTTGCCAGAGAGGAAAAATTGTGATATATATGGGCCTTGGAAAAAGAAGTGTCTGAGTGAAATTGGGGTTGTCACACAGTGCATTTCCCCTGTCAAGGTCACTGATCAATACCTTAATAATGTACTTCTTAAAATCAATTCCAAGCTGGGAGGAATAAATTCTCTGTTGGCAGTGGAGCATTCTGGCCATCTTCCCCTTATTGAAGATACCCCAACAATGATTTTGGGGATGGATGTCTCTCACAGAGGTCAATTAGATATTCCATCAGTTGCAGCTGTTGTTGGATCTCGATGCTGGCCACTTATTTCAAGGTATAGAGCGTCTGTGAGAATGCAACCATCTAAGGTGGAGATGATTGATGCTCTATACAAGCCACTGGAAAATGGGGGTGACGATGGTATTATCAGGGAATTGCTTCTAGATTTCTATGATTCAAGTAACGGCCGCAAGCCAACTCAATTAATTGTCTTCAGGGATGGTGTTAGTGAATCACAATTTAATCAGGTTTTGACAGTCGAGCTTAACCAGATAATCAAGGCCTATCAACGTCTTGGTGAGGATGATGTTCCCAAGTTCACCGTGATAGTGGCACAGAAAAATCATCATACTAGGCTGTTTCAGGCTAATGGTCCTGAAAATGTTCCTCCTGGGACTGTTGTGGACACAACAATCACGCATCCAAGTAATTATGATTTTTACATGTGTGCTCATGCGGGGATGCTGGGAACATCTAGGCCTGTACATTATCATGTGCTACTTGATGAGATTGGTTTCTCGGCAGATGGCTTACAAAATTTGATCCATTCGCTGTCCTATGTGAACCAAAGAAGCACAACTGCAACCTCAGTTGTGGCACCAATATGCTATGCTCACCATGCTGCAGCTCAGATAGGACGGTTTTTGAATCTTGATGATTTATCAGAAACGGGCTTAAGTTGTGCTGCAGAGGGAAACACCCCCATCCCAGAGCTTCCAAGATTGCATAAGAATATCAGGAGTTCCATGTTCTTCTGTTGA 2697 0.4138 MTEVVPGTEEAAEPPASPQTSPDVPHNMETEQFTPTKYSIISRNGVGTTGKNISLLVNLFKVSVNAPDTVFFQYSVAITLEDKRAVESKGIGRKVIDRLYQIYSSELGGKRFAYDGGKTLYTTGPLPLNKYEFKVFLEESFRKRSAGADGSLLEETKRSKNSFQSKTFTVEISFAAKIPMQAIAVSPKEVDSDANSQDALRVLDTVLRQRAADCGCLLVRQSFFHDDPRNFTDVGAGVTAVSGFHSSFHPTQRGLTLNMDVSTTMIIKPGPVIDFLLSNQQVRESRYIDWEKAKKVLKNLRVLATHRNLEFKISGLSEKPCIQQLFSMKVKNDNGNNEGQMVEITVYEYFAKHCGIDLTTSAYLPCLDVGKPKRPNYLPLELCSLVSLQRYTKVLSPMQRASLVEKSRQKPQDRIKILKHAVGNYCYDDDPVLAACGISVEKEFALVEGRVLEAPKLKVGKNDVCIPCNGRWNFNKKTLLQPSHIDYWAVVNFSARCDTSYISRELIRCGMSKGINIERPYSLIEEEPQLRKSNPVTRVERMFDLLKSKLNKEPKLILCVLPERKNCDIYGPWKKKCLSEIGVVTQCISPVKVTDQYLNNVLLKINSKLGGINSLLAVEHSGHLPLIEDTPTMILGMDVSHRGQLDIPSVAAVVGSRCWPLISRYRASVRMQPSKVEMIDALYKPLENGGDDGIIRELLLDFYDSSNGRKPTQLIVFRDGVSESQFNQVLTVELNQIIKAYQRLGEDDVPKFTVIVAQKNHHTRLFQANGPENVPPGTVVDTTITHPSNYDFYMCAHAGMLGTSRPVHYHVLLDEIGFSADGLQNLIHSLSYVNQRSTTATSVVAPICYAHHAAAQIGRFLNLDDLSETGLSCAAEGNTPIPELPRLHKNIRSSMFFC* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02277 898 ProSiteProfiles Piwi domain profile. 556 862 IPR003165 GO:0003676
Phac11g02277 898 SMART PAZ_2_a_3 270 404 IPR003100 GO:0005515
Phac11g02277 898 Gene3D - 623 898 IPR036397 GO:0003676
Phac11g02277 898 SMART DUF1785_2 217 269 IPR014811 -
Phac11g02277 898 Pfam Argonaute linker 1 domain 219 268 IPR014811 -
Phac11g02277 898 FunFam Protein argonaute 3 624 898 - -
Phac11g02277 898 CDD PAZ_argonaute_like 269 386 - -
Phac11g02277 898 ProSiteProfiles PAZ domain profile. 294 387 IPR003100 GO:0005515
Phac11g02277 898 MobiDBLite consensus disorder prediction 1 29 - -
Phac11g02277 898 Pfam Piwi domain 556 861 IPR003165 GO:0003676
Phac11g02277 898 Pfam N-terminal domain of argonaute 51 207 IPR032474 -
Phac11g02277 898 Gene3D paz domain 263 391 - -
Phac11g02277 898 Gene3D - 451 617 - -
Phac11g02277 898 CDD Piwi_ago-like 431 856 IPR045246 -
Phac11g02277 898 Pfam Argonaute linker 2 domain 416 458 IPR032472 -
Phac11g02277 898 SUPERFAMILY PAZ domain 264 426 IPR036085 GO:0005515
Phac11g02277 898 Pfam PAZ domain 273 403 IPR003100 GO:0005515
Phac11g02277 898 SUPERFAMILY Ribonuclease H-like 540 860 IPR012337 -
Phac11g02277 898 FunFam Protein argonaute 7 264 391 - -
Phac11g02277 898 SMART Piwi_a_2 556 862 IPR003165 GO:0003676
Phac11g02277 898 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 32 862 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02277 Phac-Chr11 33752703 33762928 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02277 43 898 Eukaryotic Initiation Factors Gene Family AT5G43810 35.667 8.06e-158 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02277 K11593 - gmx:100778875 1557.35