Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02276 ATGACAGAGGTAGTTCCTGGAACTGAAGAGGCTGCTGAACCTCCAGCATCACCTCAAACATCTCCTGATGTGCCACATAATATGGAAACAGAACAATTCACTCCTACAAAGTATTCTATTATCAGTAGGAATGGGGTTGGGACCACAGGAAAAAACATATCTTTACTTGTGAATCTTTTCAAAGTTTCTGTCAATGCTCCAGACACAGTGTTTTTCCAGTATAGTGTTGCTATTACTTTAGAAGATAAGCGAGCAGTTGAAAGCAAGGGCATTGGGAGAAAAGTGATTGATAGGCTTTACCAAATATACTCTTCTGAACTTGGTGGCAAAAGGTTTGCCTATGATGGAGGGAAAACTTTGTACACAACGGGTCCTCTGCCACTAAATAAGTATGAGTTCAAAGTGTTTTTGGAGGAATCGTTTAGAAAACGCAGTAGTGCTGGTGCGGATGGAAGTCTTCTTGAGGAAACTAAACGGTCAAAAAATTCTTTTCAGTCAAAGACATTCACGGTGGAGATAAGTTTTGCTGCCAAAATACCCATGCAGGCCATTGCTGTTTCTCCGAAAGAGGTTGACTCAGATGCCAATTCTCAAGATGCGTTGAGAGTGCTTGATACTGTACTGAGGCAGCGTGCAGCTGACTGTGGATGTCTTTTAGTAAGGCAGTCTTTTTTTCATGATGACCCAAGAAATTTCACTGATGTTGGGGCTGGTGTAACAGCAGTCTCGGGTTTTCATTCGAGTTTTCATCCCACACAGCGAGGATTGACTCTCAATATGGACGTGTCAACAACTATGATCATAAAACCTGGTCCTGTAATTGATTTTCTGTTATCAAATCAGCAAGTGAGGGAATCCCGTTATATTGACTGGGAAAAGGCCAAAAAAGTGCTTAAAAATTTAAGGGTGCTAGCAACTCATCGAAACTTGGAATTTAAAATTTCTGGCTTGAGTGAGAAACCGTGCATTCAGCAACTTTTTAGTATGAAGGTTAAAAATGACAACGGCAATAATGAAGGACAGATGGTGGAGATTACTGTATATGAATATTTTGCCAAACATTGTGGCATTGATCTGACCACATCTGCCTATCTTCCATGTCTTGATGTTGGAAAACCAAAACGGCCCAACTATCTTCCTTTGGAGTTATGTTCACTTGTGTCCCTCCAACGCTATACAAAGGTACTCTCTCCGATGCAAAGAGCATCTTTAGTTGAGAAATCACGCCAAAAGCCTCAAGATAGAATCAAAATTCTGAAACATGCTGTAGGAAACTATTGCTACGATGATGATCCTGTTCTTGCTGCATGTGGAATTTCTGTTGAGAAAGAATTTGCTCTTGTTGAAGGTCGTGTTCTTGAGGCTCCAAAGTTGAAGGTTGGTAAGAATGATGTTTGCATCCCATGTAATGGAAGGTGGAATTTTAATAAGAAGACACTTCTACAACCATCGCATATTGATTATTGGGCTGTTGTCAACTTTTCTGCAAGATGTGATACTAGTTACATATCAAGGGAGCTGATCAGATGTGGAATGAGCAAGGGCATTAACATTGAACGGCCGTACTCTTTGATAGAGGAGGAACCACAGTTGAGAAAATCTAACCCTGTTACAAGGGTTGAAAGAATGTTTGACCTGCTGAAGTCAAAACTAAATAAAGAACCAAAGTTGATTCTATGTGTCTTGCCAGAGAGGAAAAATTGTGATATATATGGGCCTTGGAAAAAGAAGTGTCTGAGTGAAATTGGGGTTGTCACACAGTGCATTTCCCCTGTCAAGGTCACTGATCAATACCTTAATAATGTACTTCTTAAAATCAATTCCAAGCTGGGAGGAATAAATTCTCTGTTGGCAGTGGAGCATTCTGGCCATCTTCCCCTTATTGAAGATACCCCAACAATGATTTTGGGGATGGATGTCTCTCACAGAGGTCAATTAGATATTCCATCAGTTGCAGCTGTTGTTGGATCTCGATGCTGGCCACTTATTTCAAGGTATAGAGCGTCTGTGAGAATGCAACCATCTAAGGTGGAGATGATTGATGCTCTATACAAGCCACTGGAAAATGGGGGTGACGATGGTATTATCAGGGAATTGCTTCTAGATTTCTATGATTCAAGTAACGGCCGCAAGCCAACTCAATTAATTGTCTTCAGGGATGGTGTTAGTGAATCACAATTTAATCAGGTTTTGACAGTCGAGCTTAACCAGATAATCAAGGCCTATCAACGTCTTGGTGAGGATGATGTTCCCAAGTTCACCGTGATAGTGGCACAGAAAAATCATCATACTAGGCTGTTTCAGGCTAATGGTCCTGAAAATGTTCCTCCTGGGACTGTTGTGGACACAACAATCACGCATCCAAGTAATTATGATTTTTACATGTGTGCTCATGCGGGGATGCTGGGAACATCTAGGCCTGTACATTATCATGTGCTACTTGATGAGATTGGTTTCTCGGCAGATGGCTTACAAAATTTGATCCATTCGCTGTCCTATGTGAACCAAAGAAGCACAACTGCAACCTCAGTTGTGGCACCAATATGCTATGCTCACCATGCTGCAGCTCAGATAGGACGGTTTTTGAATCTTGATGATTTATCAGAAACGGGCTTAAGTTGTGCTGCAGAGGGAAACACCCCCATCCCAGAGCTTCCAAGATTGCATAAGAATATCAGGAGTTCCATGTTCTTCTGTTGA 2700 0.4141 MTEVVPGTEEAAEPPASPQTSPDVPHNMETEQFTPTKYSIISRNGVGTTGKNISLLVNLFKVSVNAPDTVFFQYSVAITLEDKRAVESKGIGRKVIDRLYQIYSSELGGKRFAYDGGKTLYTTGPLPLNKYEFKVFLEESFRKRSSAGADGSLLEETKRSKNSFQSKTFTVEISFAAKIPMQAIAVSPKEVDSDANSQDALRVLDTVLRQRAADCGCLLVRQSFFHDDPRNFTDVGAGVTAVSGFHSSFHPTQRGLTLNMDVSTTMIIKPGPVIDFLLSNQQVRESRYIDWEKAKKVLKNLRVLATHRNLEFKISGLSEKPCIQQLFSMKVKNDNGNNEGQMVEITVYEYFAKHCGIDLTTSAYLPCLDVGKPKRPNYLPLELCSLVSLQRYTKVLSPMQRASLVEKSRQKPQDRIKILKHAVGNYCYDDDPVLAACGISVEKEFALVEGRVLEAPKLKVGKNDVCIPCNGRWNFNKKTLLQPSHIDYWAVVNFSARCDTSYISRELIRCGMSKGINIERPYSLIEEEPQLRKSNPVTRVERMFDLLKSKLNKEPKLILCVLPERKNCDIYGPWKKKCLSEIGVVTQCISPVKVTDQYLNNVLLKINSKLGGINSLLAVEHSGHLPLIEDTPTMILGMDVSHRGQLDIPSVAAVVGSRCWPLISRYRASVRMQPSKVEMIDALYKPLENGGDDGIIRELLLDFYDSSNGRKPTQLIVFRDGVSESQFNQVLTVELNQIIKAYQRLGEDDVPKFTVIVAQKNHHTRLFQANGPENVPPGTVVDTTITHPSNYDFYMCAHAGMLGTSRPVHYHVLLDEIGFSADGLQNLIHSLSYVNQRSTTATSVVAPICYAHHAAAQIGRFLNLDDLSETGLSCAAEGNTPIPELPRLHKNIRSSMFFC* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02276 899 CDD PAZ_argonaute_like 270 387 - -
Phac11g02276 899 SUPERFAMILY PAZ domain 265 427 IPR036085 GO:0005515
Phac11g02276 899 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 32 863 - -
Phac11g02276 899 SMART Piwi_a_2 557 863 IPR003165 GO:0003676
Phac11g02276 899 SUPERFAMILY Ribonuclease H-like 541 861 IPR012337 -
Phac11g02276 899 Gene3D - 624 899 IPR036397 GO:0003676
Phac11g02276 899 Pfam Argonaute linker 1 domain 220 269 IPR014811 -
Phac11g02276 899 SMART DUF1785_2 218 270 IPR014811 -
Phac11g02276 899 Gene3D - 452 618 - -
Phac11g02276 899 MobiDBLite consensus disorder prediction 1 29 - -
Phac11g02276 899 Pfam N-terminal domain of argonaute 51 208 IPR032474 -
Phac11g02276 899 SMART PAZ_2_a_3 271 405 IPR003100 GO:0005515
Phac11g02276 899 FunFam Protein argonaute 7 265 392 - -
Phac11g02276 899 Gene3D paz domain 264 392 - -
Phac11g02276 899 ProSiteProfiles PAZ domain profile. 295 388 IPR003100 GO:0005515
Phac11g02276 899 Pfam Piwi domain 557 862 IPR003165 GO:0003676
Phac11g02276 899 Pfam PAZ domain 274 404 IPR003100 GO:0005515
Phac11g02276 899 ProSiteProfiles Piwi domain profile. 557 863 IPR003165 GO:0003676
Phac11g02276 899 CDD Piwi_ago-like 432 857 IPR045246 -
Phac11g02276 899 FunFam Protein argonaute 3 625 899 - -
Phac11g02276 899 Pfam Argonaute linker 2 domain 417 459 IPR032472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02276 Phac-Chr11 33752703 33762928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02276 43 899 Eukaryotic Initiation Factors Gene Family AT5G43810 35.627 1.25e-157 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02276 K11593 - gmx:100778875 1557.35